RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 KCNJ14Q9UNX9 436 aa22.51■■□□□ 1.19
SYNGR1-207ENST00000489206 IQSEC3Q9UPP2 1182 aaPredicted RBP22.51■■□□□ 1.19
SYNGR1-207ENST00000489206 CALM1P0DP23 149 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 CALM2P0DP24 149 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 CALM3P0DP25 149 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 FANCCQ00597 558 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 AKAP17AQ02040 695 aaKnown RBP22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 LONRF3Q496Y0 759 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 NYAP1Q6ZVC0 841 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 ZSCAN10Q96SZ4 725 aaPredicted RBP22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 NYXQ9GZU5 481 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 ZBTB22O15209 634 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 CEP135Q66GS9 1140 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 TMC6Q7Z403 805 aa22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 FAM84BQ96KN1 310 aaPredicted RBP22.5■■□□□ 1.19
SYNGR1-207ENST00000489206 C3orf67Q6ZVT6 689 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 FBXO33Q7Z6M2 555 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 CCAR2Q8N163 923 aaKnown RBP22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 TAOK2Q9UL54 1235 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 SRPRBQ9Y5M8 271 aaKnown RBP22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 KCNQ2O43526 872 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 PTPN14Q15678 1187 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 CATIPQ7Z7H3 387 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 IQCA1Q86XH1 822 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 ENAHQ8N8S7 591 aaPredicted RBP22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 HSD3B7Q9H2F3 369 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 USP21Q9UK80 565 aa22.49■■□□□ 1.19
SYNGR1-207ENST00000489206 PRPF3O43395 683 aaKnown RBP22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 SFPQP23246 707 aaKnown RBP eCLIP22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 MDM2Q00987 491 aaPredicted RBP22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 FNBP4Q8N3X1 1017 aaPredicted RBP22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 CCDC112Q8NEF3 446 aa22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 ANKRD7Q92527 254 aa22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 TSC1Q92574 1164 aa22.48■■□□□ 1.19
SYNGR1-207ENST00000489206 DDAH1O94760 285 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 IFIT1BQ5T764 474 aaKnown RBP22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 NT5DC1Q5TFE4 455 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 ANKRD2Q9GZV1 360 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 DACH1Q9UI36 760 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 PCDHA5Q9Y5H7 936 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 BMP15O95972 392 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 GTF2E1P29083 439 aaPredicted RBP22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 RC3H1Q5TC82 1133 aaKnown RBP22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 TRIML1Q8N9V2 468 aa22.47■■□□□ 1.19
SYNGR1-207ENST00000489206 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 DYNLL1P63167 89 aaKnown RBP22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 FUT2Q10981 343 aa22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 NR5A1Q13285 461 aa22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 POSTNQ15063 836 aa22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 CELF1Q92879 486 aaKnown RBP22.46■■□□□ 1.19
SYNGR1-207ENST00000489206 ORC4O43929 436 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 IGSF3O75054 1194 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 ISM2Q6H9L7 571 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 ARMCX5Q6P1M9 558 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 CCDC82Q8N4S0 544 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 NSUN4Q96CB9 384 aaKnown RBP22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 PHF20Q9BVI0 1012 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 CCDC94Q9BW85 323 aaPredicted RBP22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 PCDHB6Q9Y5E3 794 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 USP27XA6NNY8 438 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 TUBB4AP04350 444 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 KRT2P35908 639 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 NT5C2P49902 561 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 FOXP4Q8IVH2 680 aaPredicted RBP22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 MLKLQ8NB16 471 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 CCDC34Q96HJ3 373 aa22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.45■■□□□ 1.18
SYNGR1-207ENST00000489206 TRIM75PA6NK02 468 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 UBASH3AP57075 661 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 RPS8P62241 208 aaKnown RBP22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 PKN1Q16512 942 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 TBC1D9BQ66K14 1250 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 CTR9Q6PD62 1173 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 CMTR1Q8N1G2 835 aaKnown RBP22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 ZNF384Q8TF68 577 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 CRNKL1Q9BZJ0 848 aaKnown RBP22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 BRMS1Q9HCU9 246 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 BTAF1O14981 1849 aa22.44■■□□□ 1.18
SYNGR1-207ENST00000489206 SERPINC1P01008 464 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 OXER1Q8TDS5 423 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 ATP8A2Q9NTI2 1148 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 AATFQ9NY61 560 aaKnown RBP eCLIP22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 POLR2DO15514 142 aaKnown RBP22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 CCP110O43303 1012 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 ATP1A3P13637 1013 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 SARSP49591 514 aaKnown RBP22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 TROAPQ12815 778 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 SMARCE1Q969G3 411 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 QTRT2Q9H974 415 aaKnown RBP22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 CABP5Q9NP86 173 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 MAN1B1Q9UKM7 699 aa22.43■■□□□ 1.18
SYNGR1-207ENST00000489206 NHSQ6T4R5 1651 aa22.42■■□□□ 1.18
SYNGR1-207ENST00000489206 RPS6KA4O75676 772 aa22.42■■□□□ 1.18
SYNGR1-207ENST00000489206 HIBADHP31937 336 aaKnown RBP22.42■■□□□ 1.18
SYNGR1-207ENST00000489206 CT47A1Q5JQC4 288 aaPredicted RBP22.42■■□□□ 1.18
SYNGR1-207ENST00000489206 SERTAD1Q9UHV2 236 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms