RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 GABPB1Q06547 395 aaPredicted RBP19.61■□□□□ 0.73
NPHP4-209ENST00000489180 GCKRQ14397 625 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 UBL4BQ8N7F7 174 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 GPT2Q8TD30 523 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 ALDH3A1P30838 453 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 PPFIBP2Q8ND30 876 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 KIAA1524Q8TCG1 905 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 GNPATO15228 680 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 PFKFB1P16118 471 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 SWAP70Q9UH65 585 aa19.61■□□□□ 0.73
NPHP4-209ENST00000489180 PDE8AO60658 829 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 ZYXQ15942 572 aaKnown RBP19.6■□□□□ 0.73
NPHP4-209ENST00000489180 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 ASXL2Q76L83 1435 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 CIB2O75838 187 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 TPD52P55327 224 aaPredicted RBP19.6■□□□□ 0.73
NPHP4-209ENST00000489180 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.734e-8■■■■□ 26.3
NPHP4-209ENST00000489180 CABP7Q86V35 215 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 FAM47AQ5JRC9 791 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 PLCD3Q8N3E9 789 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 SPATA5Q8NB90 893 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 USTQ9Y2C2 406 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
NPHP4-209ENST00000489180 KLHL30Q0D2K2 578 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 ASIC3Q9UHC3 531 aa19.6■□□□□ 0.73
NPHP4-209ENST00000489180 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
NPHP4-209ENST00000489180 KCNA6P17658 529 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 FMNL3Q8IVF7 1028 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 TRPM2O94759 1503 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 IFT74Q96LB3 600 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 NLRC4Q9NPP4 1024 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 SBNO1A3KN83 1393 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 A0A0D9SFI3 127 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 STX10O60499 249 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 RRAGAQ7L523 313 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 TPCN1Q9ULQ1 816 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 PZPP20742 1482 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 ZNF518AQ6AHZ1 1483 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 E7EVH7 732 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 ADCY7P51828 1080 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 ERCC6LQ2NKX8 1250 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 FYB2Q5VWT5 728 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 SH3TC1Q8TE82 1336 aa19.59■□□□□ 0.73
NPHP4-209ENST00000489180 BUB1BO60566 1050 aaPredicted RBP19.58■□□□□ 0.73
NPHP4-209ENST00000489180 ZNF131P52739 623 aa19.58■□□□□ 0.73
NPHP4-209ENST00000489180 CALCRLQ16602 461 aa19.58■□□□□ 0.73
NPHP4-209ENST00000489180 HSPA1LP34931 641 aa19.58■□□□□ 0.73
NPHP4-209ENST00000489180 USH1GQ495M9 461 aa19.58■□□□□ 0.73
NPHP4-209ENST00000489180 PCK1P35558 622 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 SFMBT2Q5VUG0 894 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 USP28Q96RU2 1077 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 CSRNP2Q9H175 543 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 FAM204AQ9H8W3 233 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 MYSM1Q5VVJ2 828 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.72
NPHP4-209ENST00000489180 SLC52A2Q9HAB3 445 aa19.58■□□□□ 0.72
NPHP4-209ENST00000489180 RNF123Q5XPI4 1314 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 SMTNP53814 917 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 PAK2Q13177 524 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 SMC1BQ8NDV3 1235 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 IFIH1Q9BYX4 1025 aaKnown RBP19.57■□□□□ 0.72
NPHP4-209ENST00000489180 KIAA1468Q9P260 1216 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 ARHGEF35A5YM69 484 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 CFAP221Q4G0U5 840 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 MYCT1Q8N699 235 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 MYO1AQ9UBC5 1043 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 PARP3Q9Y6F1 533 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 CLUL1Q15846 466 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 ZNF827Q17R98 1081 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 CCDC14Q49A88 953 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 PNMA8AQ86V59 439 aaPredicted RBP19.57■□□□□ 0.72
NPHP4-209ENST00000489180 GCNT3O95395 438 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 RPS6KA1Q15418 735 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 PTPROQ16827 1216 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 ADALQ6DHV7 355 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 C2CD5Q86YS7 1000 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 CABS1Q96KC9 395 aa19.57■□□□□ 0.72
NPHP4-209ENST00000489180 ARID4AP29374 1257 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-209ENST00000489180 NEDD9Q14511 834 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 LPIN2Q92539 896 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 GRM1Q13255 1194 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 LIN9Q5TKA1 542 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 GKAP1Q5VSY0 366 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-209ENST00000489180 GAS2L3Q86XJ1 694 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 HOXB7P09629 217 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 DSCC1Q9BVC3 393 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 MYCLP12524 364 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-209ENST00000489180 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-209ENST00000489180 MTMR6Q9Y217 621 aa19.56■□□□□ 0.72
NPHP4-209ENST00000489180 EDC4Q6P2E9 1401 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms