RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 COL23A1Q86Y22 540 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-207ENST00000488934 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 PNISRQ8TF01 805 aaKnown RBP6.7□□□□□ -1.34
SF3A3-207ENST00000488934 PHACTR3Q96KR7 559 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 PLVAPQ9BX97 442 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 PDGFDQ9GZP0 370 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-207ENST00000488934 SUV39H2Q9H5I1 410 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 C1orf115Q9H7X2 142 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 KDM3BQ7LBC6 1761 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 OPLAHO14841 1288 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 RPS6KA4O75676 772 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 RGS9O75916 674 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-207ENST00000488934 SASH3O75995 380 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 STARD3NLO95772 234 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 PSAPP07602 524 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 COL8A1P27658 744 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 RFC4P35249 363 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 CRKLP46109 303 aaKnown RBP6.69□□□□□ -1.34
SF3A3-207ENST00000488934 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 FAM35AQ86V20 835 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 IL17REQ8NFR9 667 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 PLEKHF1Q96S99 279 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 SAP130Q9H0E3 1048 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-207ENST00000488934 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 HEG1Q9ULI3 1381 aa6.69□□□□□ -1.34
SF3A3-207ENST00000488934 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
SF3A3-207ENST00000488934 PCSK2P16519 638 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 ZAP70P43403 619 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 NRLP54845 237 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 GPLD1P80108 840 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 PLAURQ03405 335 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 PDE4CQ08493 712 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
SF3A3-207ENST00000488934 SLC39A6Q13433 755 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 TAF7Q15545 349 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-207ENST00000488934 PSAPL1Q6NUJ1 521 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 ETFBKMTQ8IXQ9 262 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 NLGN1Q8N2Q7 840 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 TRPM4Q8TD43 1214 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 RUNDC1Q96C34 613 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 NACC1Q96RE7 527 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 FRRS1LQ9P0K9 344 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 USTQ9Y2C2 406 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 KIF13BQ9NQT8 1826 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 COL15A1P39059 1388 aa6.68□□□□□ -1.34
SF3A3-207ENST00000488934 A0A087WZG4 1122 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 KRBA1A5PL33 1030 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 CYP19A1P11511 503 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 RAC1P63000 192 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 ELMSAN1Q6PJG2 1045 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 C20orf204Q6ZNR8 217 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 MCM10Q7L590 875 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 DNAJC10Q8IXB1 793 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 TTC16Q8NEE8 873 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 HELQQ8TDG4 1101 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 ZNF496Q96IT1 587 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 SYT17Q9BSW7 474 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 BABAM1Q9NWV8 329 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 TLR7Q9NYK1 1049 aaKnown RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 CHD4Q14839 1912 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 USP42Q9H9J4 1324 aaKnown RBP6.67□□□□□ -1.34
SF3A3-207ENST00000488934 SCN7AQ01118 1682 aa6.67□□□□□ -1.34
SF3A3-207ENST00000488934 TMEM88BA6NKF7 163 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 GHRHP01286 108 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 SNRPA1P09661 255 aaKnown RBP6.66□□□□□ -1.34
SF3A3-207ENST00000488934 CPB1P15086 417 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 SOX18P35713 384 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 TMPOP42166 694 aaKnown RBP6.66□□□□□ -1.34
SF3A3-207ENST00000488934 RIPK4P57078 832 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 CALD1Q05682 793 aaKnown RBP6.66□□□□□ -1.34
SF3A3-207ENST00000488934 MSL1Q68DK7 614 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 NUDT8Q8WV74 236 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 CD2APQ9Y5K6 639 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 SOS1Q07889 1333 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-207ENST00000488934 BCORQ6W2J9 1755 aa6.66□□□□□ -1.34
SF3A3-207ENST00000488934 GYS1P13807 737 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 NID1P14543 1247 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 EIF2AK2P19525 551 aaKnown RBP6.65□□□□□ -1.34
SF3A3-207ENST00000488934 IL6STP40189 918 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-207ENST00000488934 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 INTS5Q6P9B9 1019 aaKnown RBP6.65□□□□□ -1.34
SF3A3-207ENST00000488934 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 USP20Q9Y2K6 914 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 KCNMB2Q9Y691 235 aa6.65□□□□□ -1.34
SF3A3-207ENST00000488934 MMP10P09238 476 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
SF3A3-207ENST00000488934 TTC39BQ5VTQ0 682 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-207ENST00000488934 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms