RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 RPAP2Q8IXW5 612 aaPredicted RBP22.27■■□□□ 1.16
ATG9A-222ENST00000488833 GCC1Q96CN9 775 aa22.27■■□□□ 1.16
ATG9A-222ENST00000488833 ASCC2Q9H1I8 757 aaPredicted RBP22.27■■□□□ 1.16
ATG9A-222ENST00000488833 GINM1Q9NU53 330 aa22.27■■□□□ 1.16
ATG9A-222ENST00000488833 TMOD4Q9NZQ9 345 aa22.27■■□□□ 1.16
ATG9A-222ENST00000488833 ZBTB21Q9ULJ3 1066 aa22.27■■□□□ 1.16
ATG9A-222ENST00000488833 GCLCP48506 637 aaPredicted RBP22.26■■□□□ 1.15
ATG9A-222ENST00000488833 BACE1P56817 501 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
ATG9A-222ENST00000488833 NKX2-3Q8TAU0 364 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 COA7Q96BR5 231 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 KIF1BPQ96EK5 621 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 RNF208Q9H0X6 261 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 TAOK2Q9UL54 1235 aa22.26■■□□□ 1.15
ATG9A-222ENST00000488833 ELNP15502 786 aa22.25■■□□□ 1.15
ATG9A-222ENST00000488833 IRX3P78415 501 aaPredicted RBP22.25■■□□□ 1.15
ATG9A-222ENST00000488833 TMED8Q6PL24 325 aaPredicted RBP22.25■■□□□ 1.15
ATG9A-222ENST00000488833 ZBTB40Q9NUA8 1239 aa22.25■■□□□ 1.15
ATG9A-222ENST00000488833 RCAN3Q9UKA8 241 aa22.25■■□□□ 1.15
ATG9A-222ENST00000488833 NAV1Q8NEY1 1877 aa22.24■■□□□ 1.15
ATG9A-222ENST00000488833 DDX60LQ5H9U9 1706 aaKnown RBP22.24■■□□□ 1.15
ATG9A-222ENST00000488833 GJB1P08034 283 aa22.24■■□□□ 1.15
ATG9A-222ENST00000488833 IFIT2P09913 472 aaKnown RBP22.24■■□□□ 1.15
ATG9A-222ENST00000488833 IRF5Q13568 498 aa22.24■■□□□ 1.15
ATG9A-222ENST00000488833 TTF1Q15361 905 aaPredicted RBP22.24■■□□□ 1.15
ATG9A-222ENST00000488833 SIRT2Q8IXJ6 389 aa22.24■■□□□ 1.15
ATG9A-222ENST00000488833 UNC93B1Q9H1C4 597 aa22.24■■□□□ 1.15
ATG9A-222ENST00000488833 C19orf81C9J6K1 198 aa22.23■■□□□ 1.15
ATG9A-222ENST00000488833 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
ATG9A-222ENST00000488833 INHAP05111 366 aa22.23■■□□□ 1.15
ATG9A-222ENST00000488833 GJA8P48165 433 aa22.23■■□□□ 1.15
ATG9A-222ENST00000488833 PXYLP1Q8TE99 480 aa22.23■■□□□ 1.15
ATG9A-222ENST00000488833 DNAJC2Q99543 621 aaKnown RBP22.23■■□□□ 1.15
ATG9A-222ENST00000488833 GH2P01242 217 aa22.22■■□□□ 1.15
ATG9A-222ENST00000488833 PDE6AP16499 860 aa22.22■■□□□ 1.15
ATG9A-222ENST00000488833 RIOK1Q9BRS2 568 aaKnown RBP22.22■■□□□ 1.15
ATG9A-222ENST00000488833 EHD4Q9H223 541 aa22.22■■□□□ 1.15
ATG9A-222ENST00000488833 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
ATG9A-222ENST00000488833 SERPINB13Q9UIV8 391 aa22.22■■□□□ 1.15
ATG9A-222ENST00000488833 MAGEB6P1A0A0J9YX57 407 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 GOLIM4O00461 696 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 RAB11FIP3O75154 756 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 SLC9C2Q5TAH2 1124 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 TTC6Q86TZ1 520 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 U2AF1L4Q8WU68 220 aaKnown RBP22.21■■□□□ 1.15
ATG9A-222ENST00000488833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.21■■□□□ 1.15
ATG9A-222ENST00000488833 MORF4L1Q9UBU8 362 aa22.21■■□□□ 1.15
ATG9A-222ENST00000488833 HOXA7P31268 230 aaPredicted RBP22.2■■□□□ 1.14
ATG9A-222ENST00000488833 TATDN1Q6P1N9 297 aa22.2■■□□□ 1.14
ATG9A-222ENST00000488833 P2RX7Q99572 595 aaKnown RBP22.2■■□□□ 1.14
ATG9A-222ENST00000488833 HERVK_113P62684 666 aa22.19■■□□□ 1.14
ATG9A-222ENST00000488833 USP17L2Q6R6M4 530 aa22.19■■□□□ 1.14
ATG9A-222ENST00000488833 FEZ1Q99689 392 aa22.19■■□□□ 1.14
ATG9A-222ENST00000488833 CRNKL1Q9BZJ0 848 aaKnown RBP22.19■■□□□ 1.14
ATG9A-222ENST00000488833 ZNF532Q9HCE3 1301 aa22.19■■□□□ 1.14
ATG9A-222ENST00000488833 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
ATG9A-222ENST00000488833 ZYXQ15942 572 aaKnown RBP22.18■■□□□ 1.14
ATG9A-222ENST00000488833 CERKLQ49MI3 558 aaPredicted RBP22.18■■□□□ 1.14
ATG9A-222ENST00000488833 HABP4Q5JVS0 413 aaKnown RBP22.18■■□□□ 1.14
ATG9A-222ENST00000488833 EDC3Q96F86 508 aaKnown RBP22.18■■□□□ 1.14
ATG9A-222ENST00000488833 EMILIN3Q9NT22 766 aa22.18■■□□□ 1.14
ATG9A-222ENST00000488833 PEX10O60683 326 aa22.17■■□□□ 1.14
ATG9A-222ENST00000488833 FARP2O94887 1054 aaPredicted RBP22.17■■□□□ 1.14
ATG9A-222ENST00000488833 POLR3DP05423 398 aaPredicted RBP22.17■■□□□ 1.14
ATG9A-222ENST00000488833 ABCB5Q2M3G0 1257 aa22.17■■□□□ 1.14
ATG9A-222ENST00000488833 TXNRD2Q9NNW7 524 aa22.17■■□□□ 1.14
ATG9A-222ENST00000488833 PLXNB2O15031 1838 aa22.17■■□□□ 1.14
ATG9A-222ENST00000488833 SGPL1O95470 568 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 SHMT1P34896 483 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 PLCD1P51178 756 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 C20orf194Q5TEA3 1177 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 UBE2Q1Q7Z7E8 422 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 GPRC5AQ8NFJ5 357 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 GTF3C2Q8WUA4 911 aaPredicted RBP22.16■■□□□ 1.14
ATG9A-222ENST00000488833 DPF3Q92784 378 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 DEFB118Q96PH6 123 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 BOLA2Q9H3K6 86 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 CABP5Q9NP86 173 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 PAG1Q9NWQ8 432 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 MCM9Q9NXL9 1143 aa22.16■■□□□ 1.14
ATG9A-222ENST00000488833 TRIOBPQ9H2D6 2365 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 TCRBV5S4A2TA0A5A2 114 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 H0YGN5 161 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 HMGCRP04035 888 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 LCORLQ8N3X6 602 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 C12orf42Q96LP6 360 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 PAGR1Q9BTK6 254 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 HTATIP2Q9BUP3 242 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 GJD2Q9UKL4 321 aa22.15■■□□□ 1.14
ATG9A-222ENST00000488833 TFRCP02786 760 aaKnown RBP22.14■■□□□ 1.13
ATG9A-222ENST00000488833 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
ATG9A-222ENST00000488833 SDR42E1Q8WUS8 393 aa22.14■■□□□ 1.13
ATG9A-222ENST00000488833 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATG9A-222ENST00000488833 PAK6Q9NQU5 681 aaPredicted RBP22.14■■□□□ 1.13
ATG9A-222ENST00000488833 RBPJLQ9UBG7 517 aa22.14■■□□□ 1.13
ATG9A-222ENST00000488833 ATP5JP18859 108 aa22.13■■□□□ 1.13
ATG9A-222ENST00000488833 USP14P54578 494 aa22.13■■□□□ 1.13
ATG9A-222ENST00000488833 ERVK-9P63128 1117 aa22.13■■□□□ 1.13
ATG9A-222ENST00000488833 ERVK-24P63145 666 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms