RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
ABCB1-207ENST00000488737 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
ABCB1-207ENST00000488737 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
ABCB1-207ENST00000488737 SDR42E1Q8WUS8 393 aa16.33■□□□□ 0.2
ABCB1-207ENST00000488737 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.2
ABCB1-207ENST00000488737 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
ABCB1-207ENST00000488737 COL24A1Q17RW2 1714 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 PSDA5PKW4 1024 aaPredicted RBP16.32■□□□□ 0.2
ABCB1-207ENST00000488737 USP27XA6NNY8 438 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 TUBB4AP04350 444 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 CALM1P0DP23 149 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 CALM2P0DP24 149 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 CALM3P0DP25 149 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
ABCB1-207ENST00000488737 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 KANK3Q6NY19 840 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
ABCB1-207ENST00000488737 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 MINDY4BA8MYZ0 360 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 ZBTB22O15209 634 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 PCDHA5Q9Y5H7 936 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 POSTNQ15063 836 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
ABCB1-207ENST00000488737 ENAHQ8N8S7 591 aaPredicted RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
ABCB1-207ENST00000488737 CCP110O43303 1012 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 DDAH1O94760 285 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 BMP15O95972 392 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 UBASH3AP57075 661 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 FOXP4Q8IVH2 680 aaPredicted RBP16.3■□□□□ 0.2
ABCB1-207ENST00000488737 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
ABCB1-207ENST00000488737 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 SARSP49591 514 aaKnown RBP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 NCBP1Q09161 790 aaKnown RBP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 FUT2Q10981 343 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 NR5A1Q13285 461 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 VPS72Q15906 364 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 LINC00116Q8NCU8 138 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 PHF20Q9BVI0 1012 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 PCDHB6Q9Y5E3 794 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 ORC4O43929 436 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 SERPINC1P01008 464 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 VSTM4Q8IW00 320 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 CCDC34Q96HJ3 373 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
ABCB1-207ENST00000488737 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
ABCB1-207ENST00000488737 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 KRT2P35908 639 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 MORC3Q14149 939 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 PKN1Q16512 942 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
ABCB1-207ENST00000488737 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 SMARCE1Q969G3 411 aa16.28■□□□□ 0.2
ABCB1-207ENST00000488737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
ABCB1-207ENST00000488737 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 ACTN4O43707 911 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 IGSF3O75054 1194 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 NT5C2P49902 561 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 SPATA20Q8TB22 786 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 ZNF384Q8TF68 577 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 ANKRD2Q9GZV1 360 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 BRMS1Q9HCU9 246 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 CABP5Q9NP86 173 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.2
ABCB1-207ENST00000488737 SERTAD1Q9UHV2 236 aa16.27■□□□□ 0.2
ABCB1-207ENST00000488737 BRWD3Q6RI45 1802 aa16.27■□□□□ 0.19
ABCB1-207ENST00000488737 KCNQ2O43526 872 aa16.27■□□□□ 0.19
ABCB1-207ENST00000488737 BMP6P22004 513 aa16.27■□□□□ 0.19
ABCB1-207ENST00000488737 GRIN1Q05586 938 aa16.27■□□□□ 0.19
ABCB1-207ENST00000488737 TROAPQ12815 778 aa16.27■□□□□ 0.19
ABCB1-207ENST00000488737 CFAP100Q494V2 611 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms