RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 RBL2Q08999 1139 aa18.68■□□□□ 0.58
GCOM1-210ENST00000488175 SMYD4Q8IYR2 804 aaPredicted RBP18.68■□□□□ 0.58
GCOM1-210ENST00000488175 CCDC175P0C221 793 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 PLCD1P51178 756 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 RABGGTAQ92696 567 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 EPSTI1Q96J88 318 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 FOXP1Q9H334 677 aaPredicted RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 SRPRBQ9Y5M8 271 aaKnown RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 A0A087X0B3 334 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 A0A1B0GTH6 734 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 GSG1L2A8MUP6 293 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 ATP8B1O43520 1251 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 CD44P16070 742 aaKnown RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 WTAPQ15007 396 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 IGSF22Q8N9C0 903 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 FUT8Q9BYC5 575 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
GCOM1-210ENST00000488175 ATRNO75882 1429 aa18.67■□□□□ 0.58
GCOM1-210ENST00000488175 PKD1L3Q7Z443 1732 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 WDR17Q8IZU2 1322 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 hCG_1642624A0A1W2PR95 340 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
GCOM1-210ENST00000488175 NKX1-1Q15270 411 aaPredicted RBP18.66■□□□□ 0.58
GCOM1-210ENST00000488175 ALX1Q15699 326 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 SPATA5Q8NB90 893 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
GCOM1-210ENST00000488175 IL2RBP14784 551 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 ARID4AP29374 1257 aaPredicted RBP18.66■□□□□ 0.58
GCOM1-210ENST00000488175 TDO2P48775 406 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 APTXQ7Z2E3 356 aaKnown RBP18.66■□□□□ 0.58
GCOM1-210ENST00000488175 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
GCOM1-210ENST00000488175 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
GCOM1-210ENST00000488175 TXLNAP40222 546 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 RASGRF1Q13972 1273 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 LONRF2Q1L5Z9 754 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 PPFIBP1Q86W92 1011 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 KRT23Q9C075 422 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 TMEM51Q9NW97 253 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 ADGRG1Q9Y653 693 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 TNS3Q68CZ2 1445 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 DEXIO95424 95 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 TRIML1Q8N9V2 468 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 MIGA1Q8NAN2 632 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 STAMQ92783 540 aa18.65■□□□□ 0.58
GCOM1-210ENST00000488175 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 ERCC5P28715 1186 aaPredicted RBP18.64■□□□□ 0.57
GCOM1-210ENST00000488175 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 MAP3K12Q12852 859 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 EARS2Q5JPH6 523 aaKnown RBP18.64■□□□□ 0.57
GCOM1-210ENST00000488175 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
GCOM1-210ENST00000488175 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 SPATA20Q8TB22 786 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 KANK3Q6NY19 840 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 PANX2Q96RD6 677 aa18.64■□□□□ 0.57
GCOM1-210ENST00000488175 ERICH2A1L162 156 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 SMIM22K7EJ46 135 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 ABL1P00519 1130 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 CASP14P31944 242 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 SART3Q15020 963 aaKnown RBP18.63■□□□□ 0.57
GCOM1-210ENST00000488175 ZNF569Q5MCW4 686 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 VPS54Q9P1Q0 977 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 CDHR2Q9BYE9 1310 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 PUM3Q15397 648 aaKnown RBP18.63■□□□□ 0.57
GCOM1-210ENST00000488175 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 LPIN2Q92539 896 aa18.63■□□□□ 0.57
GCOM1-210ENST00000488175 AKAP11Q9UKA4 1901 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 ADAMTSL3P82987 1691 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 H3BQF6 201 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 WNT7AO00755 349 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 PRDM1O75626 825 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 SRGAP1Q7Z6B7 1085 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 ZNF654Q8IZM8 581 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 PIGBQ92521 554 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 PAGE5Q96GU1 130 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
GCOM1-210ENST00000488175 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 KIF5CO60282 957 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 STARD3NLO95772 234 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 MCM6Q14566 821 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
GCOM1-210ENST00000488175 TNS2Q63HR2 1409 aa18.61■□□□□ 0.57
GCOM1-210ENST00000488175 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
GCOM1-210ENST00000488175 SYMPKQ92797 1274 aaKnown RBP18.61■□□□□ 0.57
GCOM1-210ENST00000488175 ANKZF1Q9H8Y5 726 aa18.61■□□□□ 0.57
GCOM1-210ENST00000488175 CAPN2P17655 700 aa18.61■□□□□ 0.57
GCOM1-210ENST00000488175 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
GCOM1-210ENST00000488175 CUL4BQ13620 913 aa18.61■□□□□ 0.57
GCOM1-210ENST00000488175 KIF4BQ2VIQ3 1234 aa18.61■□□□□ 0.57
GCOM1-210ENST00000488175 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms