RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 UTP4Q969X6 686 aaKnown RBP5.8□□□□□ -1.48
PTCD3-216ENST00000487043 RNPC3Q96LT9 517 aaKnown RBP5.8□□□□□ -1.48
PTCD3-216ENST00000487043 CARD10Q9BWT7 1032 aa5.8□□□□□ -1.48
PTCD3-216ENST00000487043 SOX17Q9H6I2 414 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-216ENST00000487043 OAS3Q9Y6K5 1087 aaKnown RBP5.8□□□□□ -1.48
PTCD3-216ENST00000487043 WISP1O95388 367 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 CYP11A1P05108 521 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 TAL1P17542 331 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-216ENST00000487043 MAOBP27338 520 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 CHMP4BP1P59074 171 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 PIP4K2BP78356 416 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 IFRD2Q12894 506 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-216ENST00000487043 PDE3AQ14432 1141 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 FXNQ16595 210 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 DUOXA2Q1HG44 320 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-216ENST00000487043 LRP10Q7Z4F1 713 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 ANKRD13AQ8IZ07 590 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 RBBP8NLQ8NC74 664 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-216ENST00000487043 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 PLPPR2Q96GM1 343 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 DNAJC7Q99615 494 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 CCDC113Q9H0I3 377 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 CCDC86Q9H6F5 360 aaKnown RBP5.79□□□□□ -1.48
PTCD3-216ENST00000487043 ANTXR1Q9H6X2 564 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 MAPK8IP1Q9UQF2 711 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 MSRB2Q9Y3D2 182 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 SMARCA2P51531 1590 aa5.79□□□□□ -1.48
PTCD3-216ENST00000487043 KIAA1324LA8MWY0 1029 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-216ENST00000487043 FSCN2O14926 492 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 PDPK1O15530 556 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 ATE1O95260 518 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 NFIAQ12857 509 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 INPP5AQ14642 412 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 UVSSAQ2YD98 709 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 ZDHHC13Q8IUH4 622 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 ARMC10Q8N2F6 343 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 SH3TC2Q8TF17 1288 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 ELMO3Q96BJ8 720 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 C7orf69Q9H7B7 122 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 CACNA2D2Q9NY47 1150 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 KCNK4Q9NYG8 393 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 CORINQ9Y5Q5 1042 aa5.78□□□□□ -1.48
PTCD3-216ENST00000487043 NCAPD3P42695 1498 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 DCDC2CA8MYV0 355 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 GFRA2O00451 464 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 ENPP3O14638 875 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 SART1O43290 800 aaKnown RBP5.77□□□□□ -1.49
PTCD3-216ENST00000487043 ZNF862O60290 1169 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 DDAH1O94760 285 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 HTR3BO95264 441 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 GJB6O95452 261 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 CTSBP07858 339 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 LIG1P18858 919 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 CASP7P55210 303 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 INTS5Q6P9B9 1019 aaKnown RBP5.77□□□□□ -1.49
PTCD3-216ENST00000487043 HDXQ7Z353 690 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 LILRB2Q8N423 598 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 KLHL23Q8NBE8 558 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 WNT8BQ93098 351 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 KLHDC7BQ96G42 594 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 USP26Q9BXU7 913 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 KANSL2Q9H9L4 492 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 OSGEPQ9NPF4 335 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 KRT82Q9NSB4 513 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 CSADQ9Y600 493 aa5.77□□□□□ -1.49
PTCD3-216ENST00000487043 TOP2AP11388 1531 aaKnown RBP5.76□□□□□ -1.49
PTCD3-216ENST00000487043 A0A1W2PQH9 124 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 HMX2A2RU54 273 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 B2RBV5 119 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-216ENST00000487043 YBX3P16989 372 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTCD3-216ENST00000487043 PLCG1P19174 1290 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 NLRP12P59046 1061 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 RASGRF1Q13972 1273 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 LRRFIP1Q32MZ4 808 aaKnown RBP5.76□□□□□ -1.49
PTCD3-216ENST00000487043 RNF43Q68DV7 783 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 KIAA1211Q6ZU35 1233 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 TTC6Q86TZ1 520 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 WDR89Q96FK6 387 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-216ENST00000487043 MYRFLQ96LU7 910 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 FMNL2Q96PY5 1086 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 DBNDD2Q9BQY9 259 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 NRSN2Q9GZP1 204 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 KCNF1Q9H3M0 494 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 FANCLQ9NW38 375 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 RNF114Q9Y508 228 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 SNCAIPQ9Y6H5 919 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 CC2D2AQ9P2K1 1620 aa5.76□□□□□ -1.49
PTCD3-216ENST00000487043 PRAMEF27A3QJZ7 478 aa5.75□□□□□ -1.49
PTCD3-216ENST00000487043 DDX3YO15523 660 aaKnown RBP5.75□□□□□ -1.49
PTCD3-216ENST00000487043 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
PTCD3-216ENST00000487043 HNRNPUQ00839 825 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTCD3-216ENST00000487043 MLECQ14165 292 aa5.75□□□□□ -1.49
PTCD3-216ENST00000487043 MTERF2Q49AM1 385 aa5.75□□□□□ -1.49
PTCD3-216ENST00000487043 C6orf15Q6UXA7 325 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms