RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PABPC4Q13310 644 aaKnown RBP eCLIP29.85■■■□□ 2.37
LIME1-206ENST00000487026 ZBTB21Q9ULJ3 1066 aa29.85■■■□□ 2.37
LIME1-206ENST00000487026 LOC285556D6RIA3 1793 aa29.85■■■□□ 2.37
LIME1-206ENST00000487026 ADCY3O60266 1144 aa29.84■■■□□ 2.37
LIME1-206ENST00000487026 CERS3Q8IU89 383 aa29.84■■■□□ 2.37
LIME1-206ENST00000487026 DNAJC2Q99543 621 aaKnown RBP29.84■■■□□ 2.37
LIME1-206ENST00000487026 GOLIM4O00461 696 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 ELNP15502 786 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 TTF1Q15361 905 aaPredicted RBP29.83■■■□□ 2.37
LIME1-206ENST00000487026 FAM110CQ1W6H9 321 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 SLC9C2Q5TAH2 1124 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 SLAIN1Q8ND83 568 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 RIOK1Q9BRS2 568 aaKnown RBP29.83■■■□□ 2.37
LIME1-206ENST00000487026 RNF208Q9H0X6 261 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 TMOD4Q9NZQ9 345 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 TAOK2Q9UL54 1235 aa29.83■■■□□ 2.37
LIME1-206ENST00000487026 RAB11FIP3O75154 756 aa29.82■■■□□ 2.36
LIME1-206ENST00000487026 GCLCP48506 637 aaPredicted RBP29.82■■■□□ 2.36
LIME1-206ENST00000487026 UBXN2AP68543 259 aa29.82■■■□□ 2.36
LIME1-206ENST00000487026 SHISA4Q96DD7 197 aa29.82■■■□□ 2.36
LIME1-206ENST00000487026 EDC3Q96F86 508 aaKnown RBP29.82■■■□□ 2.36
LIME1-206ENST00000487026 MYH1P12882 1939 aa29.82■■■□□ 2.36
LIME1-206ENST00000487026 MAGEB6P1A0A0J9YX57 407 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 USP17L10C9JJH3 530 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 GH2P01242 217 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 PDE6AP16499 860 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 COA7Q96BR5 231 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 P2RX7Q99572 595 aaKnown RBP29.81■■■□□ 2.36
LIME1-206ENST00000487026 GINM1Q9NU53 330 aa29.81■■■□□ 2.36
LIME1-206ENST00000487026 PEX10O60683 326 aa29.8■■■□□ 2.36
LIME1-206ENST00000487026 TATDN1Q6P1N9 297 aa29.8■■■□□ 2.36
LIME1-206ENST00000487026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.8■■■□□ 2.36
LIME1-206ENST00000487026 UNC93B1Q9H1C4 597 aa29.8■■■□□ 2.36
LIME1-206ENST00000487026 CHMP4BQ9H444 224 aaKnown RBP29.8■■■□□ 2.36
LIME1-206ENST00000487026 SERPINB13Q9UIV8 391 aa29.8■■■□□ 2.36
LIME1-206ENST00000487026 ZNF532Q9HCE3 1301 aa29.79■■■□□ 2.36
LIME1-206ENST00000487026 C19orf81C9J6K1 198 aa29.79■■■□□ 2.36
LIME1-206ENST00000487026 PLCD1P51178 756 aa29.79■■■□□ 2.36
LIME1-206ENST00000487026 IRX3P78415 501 aaPredicted RBP29.79■■■□□ 2.36
LIME1-206ENST00000487026 TMED8Q6PL24 325 aaPredicted RBP29.79■■■□□ 2.36
LIME1-206ENST00000487026 TTC6Q86TZ1 520 aa29.79■■■□□ 2.36
LIME1-206ENST00000487026 DOCK3Q8IZD9 2030 aa29.78■■■□□ 2.36
LIME1-206ENST00000487026 GJB1P08034 283 aa29.78■■■□□ 2.36
LIME1-206ENST00000487026 HOXA7P31268 230 aaPredicted RBP29.78■■■□□ 2.36
LIME1-206ENST00000487026 EHD4Q9H223 541 aa29.78■■■□□ 2.36
LIME1-206ENST00000487026 BOLA2Q9H3K6 86 aa29.78■■■□□ 2.36
LIME1-206ENST00000487026 EMILIN3Q9NT22 766 aa29.78■■■□□ 2.36
LIME1-206ENST00000487026 INHAP05111 366 aa29.77■■■□□ 2.36
LIME1-206ENST00000487026 IRF5Q13568 498 aa29.77■■■□□ 2.36
LIME1-206ENST00000487026 PXYLP1Q8TE99 480 aa29.77■■■□□ 2.36
LIME1-206ENST00000487026 TCRBV5S4A2TA0A5A2 114 aa29.76■■■□□ 2.35
LIME1-206ENST00000487026 POLR3DP05423 398 aaPredicted RBP29.76■■■□□ 2.35
LIME1-206ENST00000487026 GJA8P48165 433 aa29.76■■■□□ 2.35
LIME1-206ENST00000487026 EVX2Q03828 476 aa29.76■■■□□ 2.35
LIME1-206ENST00000487026 SLFNL1Q499Z3 407 aa29.76■■■□□ 2.35
LIME1-206ENST00000487026 CERKLQ49MI3 558 aaPredicted RBP29.76■■■□□ 2.35
LIME1-206ENST00000487026 NKX2-3Q8TAU0 364 aa29.76■■■□□ 2.35
LIME1-206ENST00000487026 PDE3AQ14432 1141 aa29.75■■■□□ 2.35
LIME1-206ENST00000487026 RAB3GAP1Q15042 981 aa29.75■■■□□ 2.35
LIME1-206ENST00000487026 ZYXQ15942 572 aaKnown RBP29.75■■■□□ 2.35
LIME1-206ENST00000487026 CRNKL1Q9BZJ0 848 aaKnown RBP29.75■■■□□ 2.35
LIME1-206ENST00000487026 TXNRD2Q9NNW7 524 aa29.75■■■□□ 2.35
LIME1-206ENST00000487026 PAG1Q9NWQ8 432 aa29.75■■■□□ 2.35
LIME1-206ENST00000487026 MORF4L1Q9UBU8 362 aa29.75■■■□□ 2.35
LIME1-206ENST00000487026 SMARCA5O60264 1052 aaPredicted RBP29.74■■■□□ 2.35
LIME1-206ENST00000487026 SHMT1P34896 483 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 HERVK_113P62684 666 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 ABCB5Q2M3G0 1257 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 USP17L2Q6R6M4 530 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 LCORLQ8N3X6 602 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 U2AF1L4Q8WU68 220 aaKnown RBP29.74■■■□□ 2.35
LIME1-206ENST00000487026 SDR42E1Q8WUS8 393 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 MCM9Q9NXL9 1143 aa29.74■■■□□ 2.35
LIME1-206ENST00000487026 ATP5JP18859 108 aa29.73■■■□□ 2.35
LIME1-206ENST00000487026 GJD2Q9UKL4 321 aa29.73■■■□□ 2.35
LIME1-206ENST00000487026 ARMT1Q9H993 441 aa29.72■■■□□ 2.35
LIME1-206ENST00000487026 RBPJLQ9UBG7 517 aa29.72■■■□□ 2.35
LIME1-206ENST00000487026 GPRC5AQ8NFJ5 357 aa29.71■■■□□ 2.35
LIME1-206ENST00000487026 ACER1Q8TDN7 264 aa29.71■■■□□ 2.35
LIME1-206ENST00000487026 GCC1Q96CN9 775 aa29.71■■■□□ 2.35
LIME1-206ENST00000487026 FEZ1Q99689 392 aa29.71■■■□□ 2.35
LIME1-206ENST00000487026 CABP5Q9NP86 173 aa29.71■■■□□ 2.35
LIME1-206ENST00000487026 SGPL1O95470 568 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 CHGBP05060 677 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 CYP2D6P10635 497 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 Q3C1V9 767 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 POTEEQ6S8J3 1075 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 HAUS7Q99871 368 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 LRRCC1Q9C099 1032 aa29.7■■■□□ 2.35
LIME1-206ENST00000487026 DCP1AQ9NPI6 582 aaPredicted RBP29.7■■■□□ 2.35
LIME1-206ENST00000487026 PRKAB2O43741 272 aa29.69■■■□□ 2.34
LIME1-206ENST00000487026 ADD2P35612 726 aa29.69■■■□□ 2.34
LIME1-206ENST00000487026 GABPAQ06546 454 aa29.69■■■□□ 2.34
LIME1-206ENST00000487026 DEFB118Q96PH6 123 aa29.69■■■□□ 2.34
LIME1-206ENST00000487026 PAGR1Q9BTK6 254 aa29.69■■■□□ 2.34
LIME1-206ENST00000487026 GUCY1A2P33402 732 aa29.68■■■□□ 2.34
LIME1-206ENST00000487026 UBE2Q1Q7Z7E8 422 aa29.68■■■□□ 2.34
LIME1-206ENST00000487026 DPF3Q92784 378 aa29.68■■■□□ 2.34
LIME1-206ENST00000487026 H0YGN5 161 aa29.67■■■□□ 2.34
LIME1-206ENST00000487026 MBD4O95243 580 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms