RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 VPS16Q9H269 839 aa15.02■□□□□ -0
HMGN1-216ENST00000486741 EXOC1Q9NV70 894 aa15.02■□□□□ -0
HMGN1-216ENST00000486741 COL15A1P39059 1388 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 CMA1P23946 247 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 ARID4AP29374 1257 aaPredicted RBP15.02□□□□□ -0.01
HMGN1-216ENST00000486741 NKX1-1Q15270 411 aaPredicted RBP15.02□□□□□ -0.01
HMGN1-216ENST00000486741 TTF2Q9UNY4 1162 aaKnown RBP15.02□□□□□ -0.01
HMGN1-216ENST00000486741 PCDHA5Q9Y5H7 936 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 CASQ1P31415 396 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 TXKP42681 527 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 SLC39A14Q15043 492 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 EYA3Q99504 573 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 PDCL3Q9H2J4 239 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 NCOA3Q9Y6Q9 1424 aa15.02□□□□□ -0.01
HMGN1-216ENST00000486741 CPDO75976 1380 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 BTDP43251 543 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 KIAA0825Q8IV33 1275 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 TMEM87AQ8NBN3 555 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 DYNC1I1O14576 645 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 SERPINB2P05120 415 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 EXOSC10Q01780 885 aaKnown RBP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 UBN2Q6ZU65 1347 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 GSG1L2A8MUP6 293 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 KIF5CO60282 957 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 SKIDA1Q1XH10 827 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 TSGA10IPQ3SY00 556 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 CACNA2D4Q7Z3S7 1137 aa15.01□□□□□ -0.01
HMGN1-216ENST00000486741 ARHGEF1Q92888 912 aaKnown RBP15.01□□□□□ -0.01
HMGN1-216ENST00000486741 GPS2Q13227 327 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 FKBP15Q5T1M5 1219 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 SEPT12Q8IYM1 358 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 LRRC47Q8N1G4 583 aaKnown RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 CTNND2Q9UQB3 1225 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 FRMPD2Q68DX3 1309 aaPredicted RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 KIF2AO00139 706 aaPredicted RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 PLEKHA8P1O95397 391 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 CASP7P55210 303 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 ZNF34Q8IZ26 560 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 ARPP21Q9UBL0 812 aaPredicted RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 TRIM21P19474 475 aaKnown RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 INF2Q27J81 1249 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 CPVLQ9H3G5 476 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 FANCLQ9NW38 375 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
HMGN1-216ENST00000486741 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 GNA11P29992 359 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 PCDHB6Q9Y5E3 794 aa15□□□□□ -0.01
HMGN1-216ENST00000486741 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
HMGN1-216ENST00000486741 AMPD3Q01432 767 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 PTGDRQ13258 359 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 TDRD12Q587J7 1177 aaKnown RBP14.99□□□□□ -0.01
HMGN1-216ENST00000486741 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 SEPT11Q9NVA2 429 aaKnown RBP14.99□□□□□ -0.01
HMGN1-216ENST00000486741 C3P01024 1663 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 RPS6KA4O75676 772 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 GOLGA8FQ08AF8 430 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 GOLGA8DPQ0D2H9 430 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 POLR3EQ9NVU0 708 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 SLC44A5Q8NCS7 719 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 USP40Q9NVE5 1235 aa14.99□□□□□ -0.01
HMGN1-216ENST00000486741 BIN2Q9UBW5 565 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-216ENST00000486741 PSMA7O14818 248 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 IFNAR1P17181 557 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 CUL5Q93034 780 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 CSRNP2Q9H175 543 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-216ENST00000486741 ARID5BQ14865 1188 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 FAM84BQ96KN1 310 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-216ENST00000486741 KIF28PB7ZC32 967 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 SCG2P13521 617 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 RAD51AP2Q09MP3 1159 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 KRBA2Q6ZNG9 492 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 SMYD4Q8IYR2 804 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-216ENST00000486741 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 RMND1Q9NWS8 449 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 NRXN3Q9Y4C0 1643 aa14.98□□□□□ -0.01
HMGN1-216ENST00000486741 UBE2Q2LH0YL09 131 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 CTDNEP1O95476 244 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 GUCY1A2P33402 732 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 UBXN1Q04323 297 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 ZNF397Q8NF99 534 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-216ENST00000486741 PLA2G12BQ9BX93 195 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
HMGN1-216ENST00000486741 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
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