RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	TNKS	O95271	1327 aa		10.58	□□□□□ -0.71
KIFC1-213	ENST00000486695	GOLGA8A	A7E2F4	631 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	GOLGA6L22	H0YM25	854 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	SMIM22	K7EJ46	135 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	STX6	O43752	255 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	WDHD1	O75717	1129 aa	Predicted RBP	10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	BRD1	O95696	1058 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	CALM1	P0DP23	149 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	CALM2	P0DP24	149 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	CALM3	P0DP25	149 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	PTMS	P20962	102 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	SYT1	P21579	422 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	PLCD1	P51178	756 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	RCAN1	P53805	252 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	EIF6	P56537	245 aa	Known RBP	10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	TFAP4	Q01664	338 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	CXCL9	Q07325	125 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	PPP2R5B	Q15173	497 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	DLGAP5	Q15398	846 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	IFIT1B	Q5T764	474 aa	Known RBP	10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	C9orf131	Q5VYM1	1079 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	APOA5	Q6Q788	366 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	C16orf86	Q6ZW13	317 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	CATIP	Q7Z7H3	387 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	SMARCC2	Q8TAQ2	1214 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	NKX2-3	Q8TAU0	364 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	DYNLL2	Q96FJ2	89 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	IDI2	Q9BXS1	227 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	DHX36	Q9H2U1	1008 aa	Known RBP	10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	NMRK2	Q9NPI5	230 aa		10.58	□□□□□ -0.72
KIFC1-213	ENST00000486695	ADAMTSL1	Q8N6G6	1762 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	CCDC196	A0A1B0GTZ2	297 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	PTPDC1	A2A3K4	754 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	ENTPD3	O75355	529 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	TSPY3	P0CV98	308 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	TSPY8	P0CW00	308 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZSCAN22	P10073	491 aa	Predicted RBP	10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	MCM4	P33991	863 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	CDK8	P49336	464 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	SEC23A	Q15436	765 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	FAM47A	Q5JRC9	791 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	DNAJC5G	Q8N7S2	189 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	NSUN7	Q8NE18	718 aa	Known RBP	10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	DDX11	Q96FC9	970 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	GML	Q99445	158 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	TRIM34	Q9BYJ4	488 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	TDRD3	Q9H7E2	651 aa	Known RBP	10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	NCOA5	Q9HCD5	579 aa	Known RBP	10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	SWAP70	Q9UH65	585 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	HPS5	Q9UPZ3	1129 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	ATP6V1D	Q9Y5K8	247 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	COL4A5	P29400	1685 aa		10.57	□□□□□ -0.72
KIFC1-213	ENST00000486695	DDX60L	Q5H9U9	1706 aa	Known RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	VPS37C	A5D8V6	355 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	DDX11L8	A8MPP1	907 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695		H3BQV1	296 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	MYO1B	O43795	1136 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	JAK2	O60674	1132 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	RPS12	P25398	132 aa	Known RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	RASSF7	Q02833	373 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	EVX2	Q03828	476 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	PKP1	Q13835	747 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	RTN1	Q16799	776 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	CLEC17A	Q6ZS10	378 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	MICU3	Q86XE3	530 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	DGKH	Q86XP1	1220 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	RAB11FIP4	Q86YS3	637 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZNF654	Q8IZM8	581 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	ENAH	Q8N8S7	591 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	RBM46	Q8TBY0	533 aa	Known RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	NUP133	Q8WUM0	1156 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	PRMT6	Q96LA8	375 aa	Predicted RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	ANP32E	Q9BTT0	268 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	SENP2	Q9HC62	589 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	DDX4	Q9NQI0	724 aa	Known RBP	10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	TCP11L1	Q9NUJ3	509 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	SERPINB13	Q9UIV8	391 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZDHHC9	Q9Y397	364 aa		10.56	□□□□□ -0.72
KIFC1-213	ENST00000486695	DDAH1	O94760	285 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	BAG4	O95429	457 aa	Known RBP	10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	CTDNEP1	O95476	244 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	RASA1	P20936	1047 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	CACNB3	P54284	484 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	TCP10	Q12799	353 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	NFIA	Q12857	509 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	CCDC144CP	Q8IYA2	1237 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	FANCB	Q8NB91	859 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	MTMR14	Q8NCE2	650 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	NEDD1	Q8NHV4	660 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	ANKS1A	Q92625	1134 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	EHD4	Q9H223	541 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	KAT14	Q9H8E8	782 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	RBM28	Q9NW13	759 aa	Known RBP	10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	RNF181	Q9P0P0	153 aa		10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms