RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FSCN2O14926 492 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 TAL1P17542 331 aaPredicted RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 GARTP22102 1010 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 BDNFP23560 247 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 ARL4DP49703 201 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 CHMP4BP1P59074 171 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 LMNB2Q03252 620 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 SAFB2Q14151 953 aaKnown RBP eCLIP5.64□□□□□ -1.51
RTN4-213ENST00000485749 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 ARMCX6Q7L4S7 300 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 CCDC84Q86UT8 332 aaPredicted RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 NCAPG2Q86XI2 1143 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 ZDHHC13Q8IUH4 622 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 CREBRFQ8IUR6 639 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 SLITRK4Q8IW52 837 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 PHC3Q8NDX5 983 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 FAM46AQ96IP4 442 aaKnown RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 UBL7Q96S82 380 aaPredicted RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 EHD4Q9H223 541 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 OSGEPQ9NPF4 335 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 FEZ2Q9UHY8 353 aaPredicted RBP5.64□□□□□ -1.51
RTN4-213ENST00000485749 RNF114Q9Y508 228 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 MRVI1Q9Y6F6 885 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 PRC1O43663 620 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 CDC45O75419 566 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 RPS26P62854 115 aaKnown RBP5.63□□□□□ -1.51
RTN4-213ENST00000485749 PIP4K2BP78356 416 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 CPSF6Q16630 551 aaKnown RBP eCLIP5.63□□□□□ -1.51
RTN4-213ENST00000485749 CCDC96Q2M329 555 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 HOMER1Q86YM7 354 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 ARMC10Q8N2F6 343 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 GALNT11Q8NCW6 608 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 OR6P1Q8NGX9 317 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 APPBP2Q92624 585 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 TSPAN18Q96SJ8 248 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 SRRTQ9BXP5 876 aaKnown RBP5.63□□□□□ -1.51
RTN4-213ENST00000485749 PCGF6Q9BYE7 350 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 PBX4Q9BYU1 374 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 RNF208Q9H0X6 261 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 KCNF1Q9H3M0 494 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 C7orf69Q9H7B7 122 aa5.63□□□□□ -1.51
RTN4-213ENST00000485749 TPX2Q9ULW0 747 aaKnown RBP5.63□□□□□ -1.51
RTN4-213ENST00000485749 FAM221BA6H8Z2 402 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 H3BRJ5 948 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 APPP05067 770 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 SPINK2P20155 84 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 LIG3P49916 1009 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 FCGRTP55899 365 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 POU5F1Q01860 360 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 APOBRQ0VD83 1088 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 CAMK2GQ13555 558 aaPredicted RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 L1TD1Q5T7N2 865 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 PEAR1Q5VY43 1037 aaPredicted RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 FDX2Q6P4F2 183 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 GET4Q7L5D6 327 aaPredicted RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 KIAA0907Q7Z7F0 614 aaPredicted RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 MSL3Q8N5Y2 521 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.62□□□□□ -1.51
RTN4-213ENST00000485749 HNRNPLLQ8WVV9 542 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 NKD1Q969G9 470 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 SHDQ96IW2 340 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 FAM83CQ9BQN1 747 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 PAGR1Q9BTK6 254 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 LRRC3Q9BY71 257 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 TYW1Q9NV66 732 aaKnown RBP5.62□□□□□ -1.51
RTN4-213ENST00000485749 SALL4Q9UJQ4 1053 aa5.62□□□□□ -1.51
RTN4-213ENST00000485749 GAS2O43903 313 aaKnown RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 PF4P02776 101 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 GIPRP48546 466 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 TBX4P57082 545 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 ATP11AP98196 1134 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 ZRSR2Q15696 482 aaKnown RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 PLEKHG6Q3KR16 790 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 ICE2Q659A1 982 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 DTHD1Q6ZMT9 781 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 AGMOQ6ZNB7 445 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 FAM196AQ6ZSG2 479 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 DTX1Q86Y01 620 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 FMNL3Q8IVF7 1028 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 FAM20CQ8IXL6 584 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 SYNPOQ8N3V7 929 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 PAF1Q8N7H5 531 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 SH3TC2Q8TF17 1288 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 TRIM56Q9BRZ2 755 aaKnown RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 ADAM19Q9H013 955 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 IRF2BPLQ9H1B7 796 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 RASSF4Q9H2L5 321 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 ABCB6Q9NP58 842 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 GEMIN8Q9NWZ8 242 aaKnown RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 TMEM260Q9NX78 707 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 AKAP2Q9Y2D5 859 aa5.61□□□□□ -1.51
RTN4-213ENST00000485749 OAS3Q9Y6K5 1087 aaKnown RBP5.61□□□□□ -1.51
RTN4-213ENST00000485749 BMP3P12645 472 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms