RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NCOA7Q8NI08 942 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 NEK1Q96PY6 1258 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 MTA3Q9BTC8 594 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 WDR19Q8NEZ3 1342 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 B4E1Z4 1266 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 TOMM70O94826 608 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 CAP2P40123 477 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 CRACR2BQ8N4Y2 399 aaPredicted RBP18.73■□□□□ 0.59
APOE-205ENST00000485628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.595e-31■□□□□ 8.4
APOE-205ENST00000485628 ZNF341Q9BYN7 854 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 AGXT2Q9BYV1 514 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
APOE-205ENST00000485628 IL17RBQ9NRM6 502 aa18.73■□□□□ 0.59
APOE-205ENST00000485628 OTOFQ9HC10 1997 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 KDM4AO75164 1064 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
APOE-205ENST00000485628 PSMA5P28066 241 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
APOE-205ENST00000485628 CST9Q5W186 159 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 RUFY3Q7L099 469 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 DHX32Q7L7V1 743 aaKnown RBP18.72■□□□□ 0.59
APOE-205ENST00000485628 STK11IPQ8N1F8 1099 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 ANKS1AQ92625 1134 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 ESR2Q92731 530 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
APOE-205ENST00000485628 TTC14Q96N46 770 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 GINM1Q9NU53 330 aa18.72■□□□□ 0.59
APOE-205ENST00000485628 UNCXA6NJT0 531 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 CTNND1O60716 968 aaKnown RBP18.71■□□□□ 0.59
APOE-205ENST00000485628 AKR1B1P15121 316 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 TFAP4Q01664 338 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 SHROOM1Q2M3G4 852 aaPredicted RBP18.71■□□□□ 0.59
APOE-205ENST00000485628 NOL9Q5SY16 702 aaKnown RBP18.71■□□□□ 0.59
APOE-205ENST00000485628 LDLRAD1Q5T700 205 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 SIAH1Q8IUQ4 282 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
APOE-205ENST00000485628 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 IGDCC4Q8TDY8 1250 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 ATAD5Q96QE3 1844 aa18.71■□□□□ 0.59
APOE-205ENST00000485628 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 FKBP1BP68106 108 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 TRDNQ13061 729 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 DOCK1Q14185 1865 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 SEC23AQ15436 765 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 FAM47AQ5JRC9 791 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 RCSD1Q6JBY9 416 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
APOE-205ENST00000485628 FZD1Q9UP38 647 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
APOE-205ENST00000485628 PPP1R12BO60237 982 aaPredicted RBP18.69■□□□□ 0.58
APOE-205ENST00000485628 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
APOE-205ENST00000485628 CPA1P15085 419 aa18.69■□□□□ 0.58
APOE-205ENST00000485628 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
APOE-205ENST00000485628 INPP5BP32019 993 aa18.69■□□□□ 0.58
APOE-205ENST00000485628 MCM5P33992 734 aa18.69■□□□□ 0.58
APOE-205ENST00000485628 FSTL1Q12841 308 aa18.69■□□□□ 0.58
APOE-205ENST00000485628 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
APOE-205ENST00000485628 NF2P35240 595 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 EVCP57679 992 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 RABEP1Q15276 862 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 ABCB5Q2M3G0 1257 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 TMEM179Q6ZVK1 233 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 RALYLQ86SE5 291 aaKnown RBP18.68■□□□□ 0.58
APOE-205ENST00000485628 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
APOE-205ENST00000485628 TSPY2A6NKD2 308 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 PRC1O43663 620 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 NMT2O60551 498 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 MAP3K9P80192 1104 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 RRP12Q5JTH9 1297 aaKnown RBP18.67■□□□□ 0.58
APOE-205ENST00000485628 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 SCYL3Q8IZE3 742 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 MKL1Q969V6 931 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 TMEM87BQ96K49 555 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 WRNIP1Q96S55 665 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 TRIM34Q9BYJ4 488 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 UPF3BQ9BZI7 483 aaKnown RBP18.67■□□□□ 0.58
APOE-205ENST00000485628 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
APOE-205ENST00000485628 GDF11O95390 407 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 GH2P01242 217 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 ASNSP08243 561 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 LIFRP42702 1097 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 TOB2Q14106 344 aaPredicted RBP18.66■□□□□ 0.58
APOE-205ENST00000485628 MOB2Q70IA6 237 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 CHST3Q7LGC8 479 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 ENAHQ8N8S7 591 aaPredicted RBP18.66■□□□□ 0.58
APOE-205ENST00000485628 ZKSCAN4Q969J2 545 aaPredicted RBP18.66■□□□□ 0.58
APOE-205ENST00000485628 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 ZSCAN10Q96SZ4 725 aaPredicted RBP18.66■□□□□ 0.58
APOE-205ENST00000485628 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 GBA2Q9HCG7 927 aaPredicted RBP18.66■□□□□ 0.58
APOE-205ENST00000485628 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 SNCAIPQ9Y6H5 919 aa18.66■□□□□ 0.58
APOE-205ENST00000485628 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms