RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SLC26A6Q9BXS9 759 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 TOMM22Q9NS69 142 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 SPTLC3Q9NUV7 552 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 TACC3Q9Y6A5 838 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 TNKSO95271 1327 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 IRS2Q9Y4H2 1338 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 UBR3Q6ZT12 1888 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 A0A1B0GVL5 298 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 BECN2A8MW95 431 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 AP5Z1O43299 807 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 PRPF3O43395 683 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 NEMFO60524 1076 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 ZNF202O95125 648 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 NDUFA8P51970 172 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 GSTO1P78417 241 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 AKAP17AQ02040 695 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 GRAPQ13588 217 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 PTPAQ15257 358 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 CATIPQ7Z7H3 387 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 NOSTRINQ8IVI9 506 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 GRAPLQ8TC17 118 aaPredicted RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 SDR42E1Q8WUS8 393 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 TRIM5Q9C035 493 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 BCL11BQ9C0K0 894 aaPredicted RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 INCENPQ9NQS7 918 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 SRP68Q9UHB9 627 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 HOOK1Q9UJC3 728 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 IQSEC3Q9UPP2 1182 aaPredicted RBP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 HPSEQ9Y251 543 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 XDHP47989 1333 aa8.52□□□□□ -1.05
SHROOM3-206ENST00000484236 SMTNL1A8MU46 457 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 MYO1BO43795 1136 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 BMP15O95972 392 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 PFKFB1P16118 471 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 RXRAP19793 462 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 SYKP43405 635 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 NLRP12P59046 1061 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 DYNLL1P63167 89 aaKnown RBP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 TPM4P67936 248 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 MECOMQ03112 1051 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 PDE4BQ07343 736 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 NOLC1Q14978 699 aaKnown RBP eCLIP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 IFIT1BQ5T764 474 aaKnown RBP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 RESP18Q5W5W9 173 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 CTR9Q6PD62 1173 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 PTF1AQ7RTS3 328 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 CCDC144CPQ8IYA2 1237 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 CNBD1Q8NA66 436 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 AIFM3Q96NN9 605 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 MYL10Q9BUA6 226 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 GJB4Q9NTQ9 266 aa8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 TRPC5Q9UL62 973 aaPredicted RBP8.51□□□□□ -1.05
SHROOM3-206ENST00000484236 NPHP1O15259 732 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 WDHD1O75717 1129 aaPredicted RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 LDHCP07864 332 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 KCNQ4P56696 695 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 PPP4CP60510 307 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 NFIXQ14938 502 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 C11orf57Q6ZUT1 292 aaPredicted RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 TMC4Q7Z404 712 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ZNF804AQ7Z570 1209 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 DZIP1Q86YF9 867 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 DHX40Q8IX18 779 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 DRC7Q8IY82 874 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 DIS3L2Q8IYB7 885 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 FAM177A1Q8N128 213 aaPredicted RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ENAHQ8N8S7 591 aaPredicted RBP8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 KIAA1524Q8TCG1 905 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ZNF384Q8TF68 577 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 NUP133Q8WUM0 1156 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ANKS1AQ92625 1134 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 TUBE1Q9UJT0 475 aa8.5□□□□□ -1.05
SHROOM3-206ENST00000484236 ROBO3Q96MS0 1386 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 NAV1Q8NEY1 1877 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 BTBD18B2RXH4 712 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 USP17L21D6R901 530 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 IKBKBO14920 756 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 BAG3O95817 575 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 PTPREP23469 700 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 KIF5BP33176 963 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 ST5P78524 1137 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 FUT2Q10981 343 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 TROAPQ12815 778 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms