RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PLCB1Q9NQ66 1216 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 PRDM9Q9NQV7 894 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 MAN1C1Q9NR34 630 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 LUZP4Q9P127 313 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 POLG2Q9UHN1 485 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 ASAP1Q9ULH1 1129 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TLR6Q9Y2C9 796 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TTC24A2A3L6 582 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 RNASEH2AO75792 299 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 SNUPNO95149 360 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 STAU1O95793 577 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 FAM163BP0C2L3 166 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 CCNFP41002 786 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 HALP42357 657 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 IDH3AP50213 366 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 STRN3Q13033 797 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 GTF2H3Q13889 308 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 SLC4A8Q2Y0W8 1093 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 NBPF1Q3BBV0 1214 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 FAM133BQ5BKY9 247 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 SYDE2Q5VT97 1194 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 IL31Q6EBC2 164 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 GK5Q6ZS86 529 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 CMTR1Q8N1G2 835 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 SLC7A3Q8WY07 619 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 DDX1Q92499 740 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 USP7Q93009 1102 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 MPP4Q96JB8 637 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 TTC14Q96N46 770 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 DHRS4Q9BTZ2 278 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 ABI2Q9NYB9 513 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 PGAP2Q9UHJ9 254 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 ANKRD6Q9Y2G4 727 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 FRMD4BQ9Y2L6 1034 aa6.26□□□□□ -1.41
R3HDM1-216ENST00000483065 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 TLL1O43897 1013 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 ZEB2O60315 1214 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 ABLIM3O94929 683 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 PDE6BP35913 854 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 NEK3P51956 506 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 GJA9P57773 515 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 DDX10Q13206 875 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 COBLL1Q53SF7 1204 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 C1orf228Q6PIY5 440 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 GLIS3Q8NEA6 775 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 ZDHHC1Q8WTX9 485 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 GJA10Q969M2 543 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 RTFDC1Q9BY42 306 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 PHAXQ9H814 394 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 NLRC4Q9NPP4 1024 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 KLF15Q9UIH9 416 aa6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 RTCBQ9Y3I0 505 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-216ENST00000483065 A0A1W2PP55 124 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 EREGO14944 169 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 F13A1P00488 732 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 TYRP1P17643 537 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 TFE3P19532 575 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 CYP2C19P33261 490 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 GBX1Q14549 363 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 STAT4Q14765 748 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 PDCD2Q16342 344 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 PRR16Q569H4 304 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 REC114Q7Z4M0 266 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 KRT77Q7Z794 578 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 TTC6Q86TZ1 520 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 MYLK4Q86YV6 388 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 ZNF784Q8NCA9 323 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 MENTQ9BUN1 341 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 LIN7BQ9HAP6 207 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 TCF7L1Q9HCS4 588 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 RAB6BQ9NRW1 208 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 ZFATQ9P243 1243 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 APOBEC2Q9Y235 224 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 GIT1Q9Y2X7 761 aa6.24□□□□□ -1.41
R3HDM1-216ENST00000483065 TRAV20A0A0B4J274 112 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 A0A1W2PQH9 124 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 PHF20L1A8MW92 1017 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 C9IYK1 514 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 ADCY3O60266 1144 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 TATP17735 454 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 POU3F2P20265 443 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 GUCY2CP25092 1073 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 NEK4P51957 841 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 SH3BP2P78314 561 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 STK3Q13188 491 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 TBX2Q13207 712 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 LRRC14Q15048 493 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 GNASQ5JWF2 1037 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 TMEM214Q6NUQ4 689 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 VHLLQ6RSH7 139 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 CCDC116Q8IYX3 515 aa6.23□□□□□ -1.41
R3HDM1-216ENST00000483065 TAB3Q8N5C8 712 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms