RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MARCH10Q8NA82 808 aaPredicted RBP4.05□□□□□ -1.76
USH2A-204ENST00000481786 NPHS2Q9NP85 383 aa4.05□□□□□ -1.76
USH2A-204ENST00000481786 PATL2C9JE40 543 aaKnown RBP4.04□□□□□ -1.76
USH2A-204ENST00000481786 IGF2BP3O00425 579 aaKnown RBP eCLIP4.04□□□□□ -1.76
USH2A-204ENST00000481786 TREHO43280 583 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 PSPNO60542 156 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 EOMESO95936 686 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 ITPKAP23677 461 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 TRHRP34981 398 aaPredicted RBP4.04□□□□□ -1.76
USH2A-204ENST00000481786 PLCB3Q01970 1234 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 AP3B2Q13367 1082 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 CDKAL1Q5VV42 579 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 ABHD4Q8TB40 342 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 DDX54Q8TDD1 881 aaKnown RBP4.04□□□□□ -1.76
USH2A-204ENST00000481786 STK35Q8TDR2 534 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 EPS8L3Q8TE67 593 aaKnown RBP4.04□□□□□ -1.76
USH2A-204ENST00000481786 EHD4Q9H223 541 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 PRDM10Q9NQV6 1147 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 GTF2IRD1Q9UHL9 959 aa4.04□□□□□ -1.76
USH2A-204ENST00000481786 DNAJC25-GNG10A0A024R161 153 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 GSTP1P09211 210 aaKnown RBP4.03□□□□□ -1.76
USH2A-204ENST00000481786 PDIA4P13667 645 aaKnown RBP4.03□□□□□ -1.76
USH2A-204ENST00000481786 NTF4P34130 210 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 CLCN7P51798 805 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 ENOX2Q16206 610 aaKnown RBP4.03□□□□□ -1.76
USH2A-204ENST00000481786 RALGPS1Q5JS13 557 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 PRPF40BQ6NWY9 871 aaKnown RBP4.03□□□□□ -1.76
USH2A-204ENST00000481786 MPRIPQ6WCQ1 1025 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 ASB16Q96NS5 453 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 MCOLN1Q9GZU1 580 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 XYLT2Q9H1B5 865 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 CEP164Q9UPV0 1460 aa4.03□□□□□ -1.76
USH2A-204ENST00000481786 ERCC6L2Q5T890 1561 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 MYOCOSA0A1B0GUC4 107 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 TMEM238LA0A1B0GVL6 79 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 OTOL1A6NHN0 477 aaPredicted RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 GNAT3A8MTJ3 354 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 H3BS24 57 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 GADD45BO75293 160 aaPredicted RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 PTPN12Q05209 780 aaKnown RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 FMR1Q06787 632 aaKnown RBP eCLIP4.02□□□□□ -1.77
USH2A-204ENST00000481786 GRM2Q14416 872 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 ZC3H12AQ5D1E8 599 aaKnown RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 PI16Q6UXB8 463 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 TTC6Q86TZ1 520 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 PDZD3Q86UT5 571 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 ZSCAN29Q8IWY8 852 aaPredicted RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 BAHD1Q8TBE0 780 aaPredicted RBP4.02□□□□□ -1.77
USH2A-204ENST00000481786 KCNB2Q92953 911 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 SLC26A8Q96RN1 970 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 SGPP1Q9BX95 441 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 ABCB6Q9NP58 842 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 RTEL1Q9NZ71 1219 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 SLAMF8Q9P0V8 285 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 CSADQ9Y600 493 aa4.02□□□□□ -1.77
USH2A-204ENST00000481786 PNMA6FA0A0J9YX94 578 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 HK2P52789 917 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 DLG4P78352 724 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 PPM1JQ5JR12 505 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 NPAS4Q8IUM7 802 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 AEBP1Q8IUX7 1158 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 RNF214Q8ND24 703 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 ALPK1Q96QP1 1244 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 TRAK1Q9UPV9 953 aa4.01□□□□□ -1.77
USH2A-204ENST00000481786 SSPNQ14714 243 aa4□□□□□ -1.77
USH2A-204ENST00000481786 LARP7Q4G0J3 582 aaKnown RBP eCLIP4□□□□□ -1.77
USH2A-204ENST00000481786 RPS26P11Q5JNZ5 115 aaPredicted RBP4□□□□□ -1.77
USH2A-204ENST00000481786 SND1Q7KZF4 910 aaKnown RBP eCLIP4□□□□□ -1.77
USH2A-204ENST00000481786 CXorf38Q8TB03 319 aa4□□□□□ -1.77
USH2A-204ENST00000481786 PANK1Q8TE04 598 aa4□□□□□ -1.77
USH2A-204ENST00000481786 SETDB2Q96T68 719 aa4□□□□□ -1.77
USH2A-204ENST00000481786 BCO2Q9BYV7 579 aa4□□□□□ -1.77
USH2A-204ENST00000481786 RNF32Q9H0A6 362 aa4□□□□□ -1.77
USH2A-204ENST00000481786 NLRP2Q9NX02 1062 aa4□□□□□ -1.77
USH2A-204ENST00000481786 ST14Q9Y5Y6 855 aa4□□□□□ -1.77
USH2A-204ENST00000481786 FANCD2Q9BXW9 1451 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 WASH4PA8MWX3 477 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 P4HBP07237 508 aaKnown RBP3.99□□□□□ -1.77
USH2A-204ENST00000481786 ADRB1P08588 477 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 MAPK8P45983 427 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 FCGRTP55899 365 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 FGD1P98174 961 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 ZDHHC14Q8IZN3 488 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 FEZF2Q8TBJ5 459 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 FBF1Q8TES7 1133 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 MYLIPQ8WY64 445 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 UBE2FQ969M7 185 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 C19orf44Q9H6X5 657 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 SP110Q9HB58 689 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 GCM1Q9NP62 436 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 PRDM5Q9NQX1 630 aaPredicted RBP3.99□□□□□ -1.77
USH2A-204ENST00000481786 KRT82Q9NSB4 513 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 WWC3Q9ULE0 1092 aa3.99□□□□□ -1.77
USH2A-204ENST00000481786 CNOT6Q9ULM6 557 aaKnown RBP3.99□□□□□ -1.77
USH2A-204ENST00000481786 PEG3Q9GZU2 1588 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 FAM155AB1AL88 458 aaPredicted RBP3.98□□□□□ -1.77
USH2A-204ENST00000481786 SLITRK5O94991 958 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 CELA3BP08861 270 aa3.98□□□□□ -1.77
USH2A-204ENST00000481786 SRFP11831 508 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms