RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZBTB21Q9ULJ3 1066 aa22.57■■□□□ 1.2
CLK1-211ENST00000481641 GOLIM4O00461 696 aa22.56■■□□□ 1.2
CLK1-211ENST00000481641 TNPO2O14787 897 aaKnown RBP22.56■■□□□ 1.2
CLK1-211ENST00000481641 SLC34A2O95436 690 aa22.56■■□□□ 1.2
CLK1-211ENST00000481641 FLT3LGP49771 235 aa22.56■■□□□ 1.2
CLK1-211ENST00000481641 BACE1P56817 501 aa22.56■■□□□ 1.2
CLK1-211ENST00000481641 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
CLK1-211ENST00000481641 RAB11FIP3O75154 756 aa22.55■■□□□ 1.2
CLK1-211ENST00000481641 PDE6AP16499 860 aa22.55■■□□□ 1.2
CLK1-211ENST00000481641 SLC9C2Q5TAH2 1124 aa22.55■■□□□ 1.2
CLK1-211ENST00000481641 MAGEB6P1A0A0J9YX57 407 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 ADCY3O60266 1144 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 PEX10O60683 326 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 GH2P01242 217 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 CCL5P13501 91 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 ELNP15502 786 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.2
CLK1-211ENST00000481641 TTF1Q15361 905 aaPredicted RBP22.54■■□□□ 1.2
CLK1-211ENST00000481641 FAM110CQ1W6H9 321 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 SHISA4Q96DD7 197 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 TMOD4Q9NZQ9 345 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 TAOK2Q9UL54 1235 aa22.54■■□□□ 1.2
CLK1-211ENST00000481641 USP17L10C9JJH3 530 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 PLCD1P51178 756 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 EVX2Q03828 476 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 SLFNL1Q499Z3 407 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 SLAIN1Q8ND83 568 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLK1-211ENST00000481641 BOLA2Q9H3K6 86 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 ZNF532Q9HCE3 1301 aa22.53■■□□□ 1.2
CLK1-211ENST00000481641 GCLCP48506 637 aaPredicted RBP22.52■■□□□ 1.2
CLK1-211ENST00000481641 UBXN2AP68543 259 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 TATDN1Q6P1N9 297 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 P2RX7Q99572 595 aaKnown RBP22.52■■□□□ 1.2
CLK1-211ENST00000481641 RNF208Q9H0X6 261 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 UNC93B1Q9H1C4 597 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 CHMP4BQ9H444 224 aaKnown RBP22.52■■□□□ 1.2
CLK1-211ENST00000481641 GINM1Q9NU53 330 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
CLK1-211ENST00000481641 TCRBV5S4A2TA0A5A2 114 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 C19orf81C9J6K1 198 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 SMARCA5O60264 1052 aaPredicted RBP22.51■■□□□ 1.19
CLK1-211ENST00000481641 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
CLK1-211ENST00000481641 PDE3AQ14432 1141 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 COA7Q96BR5 231 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 EMILIN3Q9NT22 766 aa22.51■■□□□ 1.19
CLK1-211ENST00000481641 ZYXQ15942 572 aaKnown RBP22.5■■□□□ 1.19
CLK1-211ENST00000481641 TMED8Q6PL24 325 aaPredicted RBP22.5■■□□□ 1.19
CLK1-211ENST00000481641 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
CLK1-211ENST00000481641 EHD4Q9H223 541 aa22.5■■□□□ 1.19
CLK1-211ENST00000481641 PAG1Q9NWQ8 432 aa22.5■■□□□ 1.19
CLK1-211ENST00000481641 CHGBP05060 677 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 INHAP05111 366 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
CLK1-211ENST00000481641 GJB1P08034 283 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 HOXA7P31268 230 aaPredicted RBP22.49■■□□□ 1.19
CLK1-211ENST00000481641 SHMT1P34896 483 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 IRF5Q13568 498 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 CERKLQ49MI3 558 aaPredicted RBP22.49■■□□□ 1.19
CLK1-211ENST00000481641 SDR42E1Q8WUS8 393 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 CRNKL1Q9BZJ0 848 aaKnown RBP22.49■■□□□ 1.19
CLK1-211ENST00000481641 TXNRD2Q9NNW7 524 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
CLK1-211ENST00000481641 DDX60LQ5H9U9 1706 aaKnown RBP22.48■■□□□ 1.19
CLK1-211ENST00000481641 ATP5JP18859 108 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 GJA8P48165 433 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 HERVK_113P62684 666 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 USP17L2Q6R6M4 530 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 PXYLP1Q8TE99 480 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 ARMT1Q9H993 441 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
CLK1-211ENST00000481641 CYP2D6P10635 497 aa22.47■■□□□ 1.19
CLK1-211ENST00000481641 ABCB5Q2M3G0 1257 aa22.47■■□□□ 1.19
CLK1-211ENST00000481641 ACER1Q8TDN7 264 aa22.47■■□□□ 1.19
CLK1-211ENST00000481641 MORF4L1Q9UBU8 362 aa22.47■■□□□ 1.19
CLK1-211ENST00000481641 PRKAB2O43741 272 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 GUCY1A2P33402 732 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 POTEEQ6S8J3 1075 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 NKX2-3Q8TAU0 364 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 U2AF1L4Q8WU68 220 aaKnown RBP22.46■■□□□ 1.19
CLK1-211ENST00000481641 FEZ1Q99689 392 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 HAUS7Q99871 368 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 LRRCC1Q9C099 1032 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 DCP1AQ9NPI6 582 aaPredicted RBP22.46■■□□□ 1.19
CLK1-211ENST00000481641 RBPJLQ9UBG7 517 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
CLK1-211ENST00000481641 MBD4O95243 580 aa22.45■■□□□ 1.18
CLK1-211ENST00000481641 ADD2P35612 726 aa22.45■■□□□ 1.18
CLK1-211ENST00000481641 GABPAQ06546 454 aa22.45■■□□□ 1.18
CLK1-211ENST00000481641 Q3C1V9 767 aa22.45■■□□□ 1.18
CLK1-211ENST00000481641 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
CLK1-211ENST00000481641 PLXNB2O15031 1838 aa22.44■■□□□ 1.18
CLK1-211ENST00000481641 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
CLK1-211ENST00000481641 PAGR1Q9BTK6 254 aa22.44■■□□□ 1.18
CLK1-211ENST00000481641 SMIM22K7EJ46 135 aa22.43■■□□□ 1.18
CLK1-211ENST00000481641 SGPL1O95470 568 aa22.43■■□□□ 1.18
CLK1-211ENST00000481641 TRIM32Q13049 653 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms