RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 CSRNP2Q9H175 543 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 MTUS1Q9ULD2 1270 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
GARNL3-216ENST00000481242 KDM3AQ9Y4C1 1321 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 PDE4DQ08499 809 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TCP10Q12799 353 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC14Q49A88 953 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TEX2Q8IWB9 1127 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CEP112Q8N8E3 955 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 FAM227BQ96M60 508 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 HAUS7Q99871 368 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 SETSIPP0DME0 302 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 MYCLP12524 364 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CCNA1P78396 465 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CHRNDQ07001 517 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TRPC3Q13507 836 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 BMS1Q14692 1282 aaKnown RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CEP128Q6ZU80 1094 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TSGA10Q9BZW7 698 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 SERPINB2P05120 415 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 HSPA4P34932 840 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 SPECC1LQ69YQ0 1117 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 KRT26Q7Z3Y9 468 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 SNX29Q8TEQ0 813 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 NUP58Q9BVL2 599 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CFBP00751 764 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 TXKP42681 527 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 GOLGA1Q92805 767 aa10.59□□□□□ -0.71
GARNL3-216ENST00000481242 NAP1L3Q99457 506 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 RRAGDQ9NQL2 400 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-216ENST00000481242 CERKLQ49MI3 558 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 IQCGQ9H095 443 aaKnown RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ZYXQ15942 572 aaKnown RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 CALCRLQ16602 461 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 GPATCH4Q5T3I0 446 aaKnown RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 TTC37Q6PGP7 1564 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ATP2A2P16615 1042 aaKnown RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 EAPPQ56P03 285 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 KRT40Q6A162 431 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 IFNL3Q8IZI9 196 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 CTAGE9A4FU28 777 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 E7EWF7 191 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 DDAH1O94760 285 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 TBC1D8BQ0IIM8 1120 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-216ENST00000481242 ASAP1Q9ULH1 1129 aa10.58□□□□□ -0.72
GARNL3-216ENST00000481242 PREX2Q70Z35 1606 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 USP14P54578 494 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 YWHAEP62258 255 aaKnown RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 CCDC186Q7Z3E2 898 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 BANK1Q8NDB2 785 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 PPP1R14CQ8TAE6 165 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 GABPB2Q8TAK5 448 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 NOC4LQ9BVI4 516 aaKnown RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 NCAPD2Q15021 1401 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 TRIM37O94972 964 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 ICA1Q05084 483 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 HERC4Q5GLZ8 1057 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 LIN9Q5TKA1 542 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 MAATS1Q7Z4T9 603 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
GARNL3-216ENST00000481242 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
GARNL3-216ENST00000481242 LPXNO60711 386 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 HSF2BPO75031 334 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 P4HA1P13674 534 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 DCAF17Q5H9S7 520 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-216ENST00000481242 NCAPH2Q6IBW4 605 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 KIAA0825Q8IV33 1275 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 GOLGA5Q8TBA6 731 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-216ENST00000481242 ZSCAN10Q96SZ4 725 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-216ENST00000481242 HEG1Q9ULI3 1381 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 CHMP2AO43633 222 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 GYG1P46976 350 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms