RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 C2CD2Q9Y426 696 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 HMMRO75330 724 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 GGCXP38435 758 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 MRPS35P82673 323 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 SSH1Q8WYL5 1049 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 EHD4Q9H223 541 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 HAUS2Q9NVX0 235 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 SHPRHQ149N8 1683 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 UBN2Q6ZU65 1347 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 GOLGA6L4A6NEF3 574 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 AGPSO00116 658 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 GHRP10912 638 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 BCRP11274 1271 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 USH1GQ495M9 461 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 TTC14Q96N46 770 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 TRAPPC9Q96Q05 1148 aa11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 ZNHIT6Q9NWK9 470 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-206ENST00000481109 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 ELF3P78545 371 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 CBX3Q13185 183 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 ANKRD20A8PQ5CZ79 823 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 CMPK2Q5EBM0 449 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 GJC2Q5T442 439 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.553e-10■■□□□ 11.9
PRPF4B-206ENST00000481109 OSBPL1AQ9BXW6 950 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 RABL2BQ9UNT1 228 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 EIF2AK4Q9P2K8 1649 aaKnown RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 EVI5O60447 810 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 MXRA7P84157 204 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 ME3Q16798 604 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 NCCRP1Q6ZVX7 275 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 WHAMMQ8TF30 809 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 OXCT2Q9BYC2 517 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 PREBQ9HCU5 417 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 ITM2BQ9Y287 266 aa11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
PRPF4B-206ENST00000481109 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 ALADP13716 330 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 ALOX15P16050 662 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 KIF5BP33176 963 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 ANKRD13BQ86YJ7 626 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 CCDC12Q8WUD4 166 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 QPCTLQ9NXS2 382 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 CROTQ9UKG9 612 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 DPPA5A6NC42 116 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 PFKFB2O60825 505 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 SSBP05455 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 ABL2P42684 1182 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 USP11P51784 963 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 OXCT1P55809 520 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.553e-14■■■■■ 28.3
PRPF4B-206ENST00000481109 ALDH1L2Q3SY69 923 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 Q6ZUG5 572 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
PRPF4B-206ENST00000481109 CTAGE15A4D2H0 777 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 GOLGA8AA7E2F4 631 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 FAM107AO95990 144 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 CTAGE8P0CG41 777 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 NLRP5P59047 1200 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 CTAGE6Q86UF2 777 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 CTAGE4Q8IX94 777 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 RSPH1Q8WYR4 309 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 TRIM11Q96F44 468 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 DCTPP1Q9H773 170 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 CHD1O14646 1710 aa11.58□□□□□ -0.56
PRPF4B-206ENST00000481109 N4BP3O15049 544 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 MMEP08473 750 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 TRIM21P19474 475 aaKnown RBP11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 SCTRP47872 440 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 SPECC1Q5M775 1068 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 LRRC43Q8N309 656 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 ANKRD24Q8TF21 1146 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 ZCWPW1Q9H0M4 648 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 NRDE2Q9H7Z3 1164 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 TRAPPC8Q9Y2L5 1435 aa11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 EIF3FO00303 357 aaPredicted RBP11.57□□□□□ -0.56
PRPF4B-206ENST00000481109 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms