RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 UBXN2AP68543 259 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 FAM110CQ1W6H9 321 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 HABP4Q5JVS0 413 aaKnown RBP20.66■□□□□ 0.9
LSG1-208ENST00000480853 SLAIN1Q8ND83 568 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 TBC1D2Q9BYX2 928 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 PNMA3Q9UL41 463 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 ZBTB21Q9ULJ3 1066 aa20.66■□□□□ 0.9
LSG1-208ENST00000480853 INHAP05111 366 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 MAP3K12Q12852 859 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 C20orf194Q5TEA3 1177 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 POTEEQ6S8J3 1075 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 EMILIN3Q9NT22 766 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 GJD2Q9UKL4 321 aa20.65■□□□□ 0.9
LSG1-208ENST00000480853 USP17L10C9JJH3 530 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 H0YGN5 161 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 GH2P01242 217 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 HLA-DOAP06340 250 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 PLCD1P51178 756 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 IRF5Q13568 498 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 Q3C1V9 767 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 UBE2Q1Q7Z7E8 422 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
LSG1-208ENST00000480853 U2AF1L4Q8WU68 220 aaKnown RBP20.64■□□□□ 0.89
LSG1-208ENST00000480853 COA7Q96BR5 231 aa20.64■□□□□ 0.89
LSG1-208ENST00000480853 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.89
LSG1-208ENST00000480853 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
LSG1-208ENST00000480853 GCLCP48506 637 aaPredicted RBP20.63■□□□□ 0.89
LSG1-208ENST00000480853 TRIM32Q13049 653 aa20.63■□□□□ 0.89
LSG1-208ENST00000480853 PABPC4Q13310 644 aaKnown RBP eCLIP20.63■□□□□ 0.89
LSG1-208ENST00000480853 HSP90AB4PQ58FF6 505 aa20.63■□□□□ 0.89
LSG1-208ENST00000480853 PXYLP1Q8TE99 480 aa20.63■□□□□ 0.89
LSG1-208ENST00000480853 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
LSG1-208ENST00000480853 TMOD4Q9NZQ9 345 aa20.63■□□□□ 0.89
LSG1-208ENST00000480853 COLQQ9Y215 455 aaPredicted RBP20.63■□□□□ 0.89
LSG1-208ENST00000480853 TRIOBPQ9H2D6 2365 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 GOLIM4O00461 696 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 IGSF3O75054 1194 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 SGPL1O95470 568 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 CHGBP05060 677 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 MS4A1P11836 297 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 PDE6AP16499 860 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 IRX3P78415 501 aaPredicted RBP20.62■□□□□ 0.89
LSG1-208ENST00000480853 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
LSG1-208ENST00000480853 SLC9C2Q5TAH2 1124 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 TATDN1Q6P1N9 297 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 DPF3Q92784 378 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 KIF1BPQ96EK5 621 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
LSG1-208ENST00000480853 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 CLASRPQ8N2M8 674 aaKnown RBP20.61■□□□□ 0.89
LSG1-208ENST00000480853 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 GCC1Q96CN9 775 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 DEFB118Q96PH6 123 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 MORF4L1Q9UBU8 362 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 PLXNB2O15031 1838 aa20.61■□□□□ 0.89
LSG1-208ENST00000480853 ZNF532Q9HCE3 1301 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 IFIT2P09913 472 aaKnown RBP20.6■□□□□ 0.89
LSG1-208ENST00000480853 SHMT1P34896 483 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 HERVK_113P62684 666 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 SERPINB13Q9UIV8 391 aa20.6■□□□□ 0.89
LSG1-208ENST00000480853 TFRCP02786 760 aaKnown RBP20.59■□□□□ 0.89
LSG1-208ENST00000480853 CYP2D6P10635 497 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 GUCY1A2P33402 732 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
LSG1-208ENST00000480853 USP17L2Q6R6M4 530 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 SDR42E1Q8WUS8 393 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 GINM1Q9NU53 330 aa20.59■□□□□ 0.89
LSG1-208ENST00000480853 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 PRKAB2O43741 272 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
LSG1-208ENST00000480853 HMMRO75330 724 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 POLR3DP05423 398 aaPredicted RBP20.58■□□□□ 0.89
LSG1-208ENST00000480853 CYP2B6P20813 491 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 TTF1Q15361 905 aaPredicted RBP20.58■□□□□ 0.89
LSG1-208ENST00000480853 LCORLQ8N3X6 602 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 PAGR1Q9BTK6 254 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 EHD4Q9H223 541 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 PORCNQ9H237 461 aa20.58■□□□□ 0.89
LSG1-208ENST00000480853 RAB11FIP3O75154 756 aa20.57■□□□□ 0.88
LSG1-208ENST00000480853 FARP2O94887 1054 aaPredicted RBP20.57■□□□□ 0.88
LSG1-208ENST00000480853 ABCB5Q2M3G0 1257 aa20.57■□□□□ 0.88
LSG1-208ENST00000480853 GPRC5AQ8NFJ5 357 aa20.57■□□□□ 0.88
LSG1-208ENST00000480853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.57■□□□□ 0.88
LSG1-208ENST00000480853 ARMT1Q9H993 441 aa20.57■□□□□ 0.88
LSG1-208ENST00000480853 PAK6Q9NQU5 681 aaPredicted RBP20.57■□□□□ 0.88
LSG1-208ENST00000480853 CNMDO75829 334 aa20.56■□□□□ 0.88
LSG1-208ENST00000480853 GABPAQ06546 454 aa20.56■□□□□ 0.88
LSG1-208ENST00000480853 SLC44A5Q8NCS7 719 aa20.56■□□□□ 0.88
LSG1-208ENST00000480853 DYNLL2Q96FJ2 89 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms