RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CPLX2Q6PUV4 134 aaKnown RBP12.03□□□□□ -0.48
SIK3-210ENST00000480468 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 ZNF662Q6ZS27 426 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 HAUS4Q9H6D7 363 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 SAR1BQ9Y6B6 198 aa12.03□□□□□ -0.48
SIK3-210ENST00000480468 FOXN1O15353 648 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 CDKL5O76039 1030 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.48
SIK3-210ENST00000480468 ERVK-24P63145 666 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 IQCEQ6IPM2 695 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 CHST3Q7LGC8 479 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.48
SIK3-210ENST00000480468 MMS19Q96T76 1030 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.48
SIK3-210ENST00000480468 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 SPEF2Q9C093 1822 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 PIK3C2AO00443 1686 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 LMO7Q8WWI1 1683 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 SRRM3A6NNA2 597 aaPredicted RBP12.02□□□□□ -0.49
SIK3-210ENST00000480468 FXR1P51114 621 aaKnown RBP eCLIP12.02□□□□□ -0.49
SIK3-210ENST00000480468 TFCP2Q12800 502 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 DRP2Q13474 957 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 KRT40Q6A162 431 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
SIK3-210ENST00000480468 EHBP1Q8NDI1 1231 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 DBNDD2Q9BQY9 259 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 ABHD10Q9NUJ1 306 aa12.02□□□□□ -0.49
SIK3-210ENST00000480468 NDUFAB1O14561 156 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 KCNQ3O43525 872 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 PRC1O43663 620 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 ABL1P00519 1130 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
SIK3-210ENST00000480468 NF2P35240 595 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 PROSER3Q2NL68 480 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 EMC10Q5UCC4 262 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 LRCH2Q5VUJ6 765 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CPLX3Q8WVH0 158 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 MAST3O60307 1309 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CPDO75976 1380 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 A0A0G2JLW4 131 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 MYO1FO00160 1098 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CLSTN1O94985 981 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
SIK3-210ENST00000480468 ITIH3Q06033 890 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CUL4BQ13620 913 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CRYMQ14894 314 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 EHD4Q9H223 541 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 VCPKMTQ9H867 229 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
SIK3-210ENST00000480468 PAG1Q9NWQ8 432 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
SIK3-210ENST00000480468 SYNRGQ9UMZ2 1314 aa12□□□□□ -0.49
SIK3-210ENST00000480468 ANO9A1A5B4 782 aa12□□□□□ -0.49
SIK3-210ENST00000480468 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
SIK3-210ENST00000480468 RASSF9O75901 435 aa12□□□□□ -0.49
SIK3-210ENST00000480468 IGKV5-2P06315 115 aa12□□□□□ -0.49
SIK3-210ENST00000480468 MYBL2P10244 700 aa12□□□□□ -0.49
SIK3-210ENST00000480468 PTPREP23469 700 aa12□□□□□ -0.49
SIK3-210ENST00000480468 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
SIK3-210ENST00000480468 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
SIK3-210ENST00000480468 KLC4Q9NSK0 619 aa12□□□□□ -0.49
SIK3-210ENST00000480468 RNF113AO15541 343 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 ACTN3Q08043 901 aaPredicted RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 FMNL3Q8IVF7 1028 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 FAXDC2Q96IV6 333 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
SIK3-210ENST00000480468 RBM28Q9NW13 759 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 SAMM50Q9Y512 469 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 ACTN4O43707 911 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 NDUFA10O95299 355 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 SCP2P22307 547 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 NAP1L1P55209 391 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 GCKRQ14397 625 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 C11orf91Q3C1V1 193 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 RABL6Q3YEC7 729 aaPredicted RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 EGFL6Q8IUX8 553 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 STK11IPQ8N1F8 1099 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 MMGT1Q8N4V1 131 aa11.99□□□□□ -0.49
SIK3-210ENST00000480468 N4BP2L2Q92802 583 aaPredicted RBP11.99□□□□□ -0.49
SIK3-210ENST00000480468 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms