RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 SBK1Q52WX2 424 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 CYB5R4Q7L1T6 521 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 KHSRPQ92945 711 aaKnown RBP eCLIP12.27□□□□□ -0.44
LINC00173-203ENST00000480237 GTF3C6Q969F1 213 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 TMEM87BQ96K49 555 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 INCENPQ9NQS7 918 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 RAD17O75943 681 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 RHBDL3P58872 404 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 NUCB2P80303 420 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 PDE4BQ07343 736 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 ESR2Q92731 530 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 ERICH2A1L162 156 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 NFKBIEO00221 500 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 IFIT3O14879 490 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 HDLBPQ00341 1268 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 TMEM67Q5HYA8 995 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 UBAC1Q9BSL1 405 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
LINC00173-203ENST00000480237 ZNRF3Q9ULT6 936 aa12.26□□□□□ -0.45
LINC00173-203ENST00000480237 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 PSMD14O00487 310 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
LINC00173-203ENST00000480237 PFKFB2O60825 505 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 PRDM1O75626 825 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 PICALMQ13492 652 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 C12orf60Q5U649 245 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
LINC00173-203ENST00000480237 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 ILDR2Q71H61 639 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 ZDHHC15Q96MV8 337 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 ZSWIM5Q9P217 1185 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 SERPINA10Q9UK55 444 aa12.25□□□□□ -0.45
LINC00173-203ENST00000480237 ORC4O43929 436 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 GJB2P29033 226 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 RASSF7Q02833 373 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 WTAPQ15007 396 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 ZNF274Q96GC6 653 aaPredicted RBP12.24□□□□□ -0.45
LINC00173-203ENST00000480237 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
LINC00173-203ENST00000480237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00173-203ENST00000480237 SCN4AP35499 1836 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 CCDC69A6NI79 296 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 CCT2P78371 535 aaKnown RBP12.23□□□□□ -0.45
LINC00173-203ENST00000480237 SCRN1Q12765 414 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 NBR1Q14596 966 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 CDC42EP5Q6NZY7 148 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 IQCA1Q86XH1 822 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 MTA3Q9BTC8 594 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
LINC00173-203ENST00000480237 LY9Q9HBG7 655 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 TNKSO95271 1327 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
LINC00173-203ENST00000480237 VIL1P09327 827 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 FGRP09769 529 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 NUDT7P0C024 238 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 LIFRP42702 1097 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 EVCP57679 992 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 PKP1Q13835 747 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 NFKBIBQ15653 356 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 APOBEC3HQ6NTF7 200 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 DYNLL2Q96FJ2 89 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 MRIQ9BWK5 157 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 NCOA5Q9HCD5 579 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 OTOFQ9HC10 1997 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 PTPRFP10586 1907 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 COL2A1P02458 1487 aaPredicted RBP12.22□□□□□ -0.45
LINC00173-203ENST00000480237 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 ZBTB43O43298 467 aa12.22□□□□□ -0.45
LINC00173-203ENST00000480237 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms