RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 COA7Q96BR5 231 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 TMOD4Q9NZQ9 345 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 ZBTB21Q9ULJ3 1066 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 PLXNB2O15031 1838 aa8.14□□□□□ -1.11
FN1-220ENST00000480024 MYH8P13535 1937 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 H0YGN5 161 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 PEX10O60683 326 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 FARP2O94887 1054 aaPredicted RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 GH2P01242 217 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 GJB1P08034 283 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 GJA8P48165 433 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 GCLCP48506 637 aaPredicted RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 BACE1P56817 501 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 IRF5Q13568 498 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 HSP90AB4PQ58FF6 505 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 FOXP4Q8IVH2 680 aaPredicted RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 U2AF1L4Q8WU68 220 aaKnown RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
FN1-220ENST00000480024 FEZ1Q99689 392 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 WDR18Q9BV38 432 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 MYH7P12883 1935 aa8.13□□□□□ -1.11
FN1-220ENST00000480024 USP17L10C9JJH3 530 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 IGSF3O75054 1194 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 MS4A1P11836 297 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 HERVK_113P62684 666 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 METTL16Q86W50 562 aaKnown RBP8.12□□□□□ -1.11
FN1-220ENST00000480024 CERS3Q8IU89 383 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 CLASRPQ8N2M8 674 aaKnown RBP8.12□□□□□ -1.11
FN1-220ENST00000480024 PXYLP1Q8TE99 480 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 DPF3Q92784 378 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 DDX19BQ9UMR2 479 aa8.12□□□□□ -1.11
FN1-220ENST00000480024 ALPK3Q96L96 1907 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 BAZ2AQ9UIF9 1905 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 RANBP2P49792 3224 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 GOLIM4O00461 696 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 HMMRO75330 724 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 HMGCRP04035 888 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 IFIT2P09913 472 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 PDE6AP16499 860 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 TTF1Q15361 905 aaPredicted RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 UBE2Q1Q7Z7E8 422 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 SIRT2Q8IXJ6 389 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 KIF1BPQ96EK5 621 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 EDC3Q96F86 508 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 DEFB118Q96PH6 123 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 P2RX7Q99572 595 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 RIOK1Q9BRS2 568 aaKnown RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 PAGR1Q9BTK6 254 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 HTATIP2Q9BUP3 242 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.11□□□□□ -1.11
FN1-220ENST00000480024 EHD4Q9H223 541 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 TXNRD2Q9NNW7 524 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 EMILIN3Q9NT22 766 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 GINM1Q9NU53 330 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 MORF4L1Q9UBU8 362 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 SERPINB13Q9UIV8 391 aa8.11□□□□□ -1.11
FN1-220ENST00000480024 COLQQ9Y215 455 aaPredicted RBP8.11□□□□□ -1.11
FN1-220ENST00000480024 ZNF532Q9HCE3 1301 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 SGPL1O95470 568 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 TFRCP02786 760 aaKnown RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 CYP2B6P20813 491 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 SHMT1P34896 483 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 PLCD1P51178 756 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 EVX2Q03828 476 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 TRIM32Q13049 653 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 ABCB5Q2M3G0 1257 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 CERKLQ49MI3 558 aaPredicted RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 CHRDL2Q6WN34 429 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 RPAP2Q8IXW5 612 aaPredicted RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 GPRC5AQ8NFJ5 357 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 TRIB2Q92519 343 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 CRNKL1Q9BZJ0 848 aaKnown RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 PAK6Q9NQU5 681 aaPredicted RBP8.1□□□□□ -1.11
FN1-220ENST00000480024 ZBTB40Q9NUA8 1239 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
FN1-220ENST00000480024 FRMPD3Q5JV73 1810 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 TCRBV5S4A2TA0A5A2 114 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 MPHOSPH10O00566 681 aaKnown RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 CYP2D6P10635 497 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 VCAM1P19320 739 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 FXR1P51114 621 aaKnown RBP eCLIP8.09□□□□□ -1.11
FN1-220ENST00000480024 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 ERVK-24P63145 666 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms