RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 FAM168AQ92567 244 aa4.45□□□□□ -1.7
ATRX-205ENST00000479487 ISL2Q96A47 359 aa4.45□□□□□ -1.7
ATRX-205ENST00000479487 LRRC3Q9BY71 257 aa4.45□□□□□ -1.7
ATRX-205ENST00000479487 MIR1-1HGQ9H1L0 117 aa4.45□□□□□ -1.7
ATRX-205ENST00000479487 PCDHA4Q9UN74 947 aa4.45□□□□□ -1.7
ATRX-205ENST00000479487 ROBO2Q9HCK4 1378 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 CILPO75339 1184 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PAPLNO95428 1278 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 FAM87AP0C7U9 286 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 GARTP22102 1010 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 RPL6Q02878 288 aaKnown RBP4.44□□□□□ -1.7
ATRX-205ENST00000479487 CAMK2GQ13555 558 aaPredicted RBP4.44□□□□□ -1.7
ATRX-205ENST00000479487 INPP5AQ14642 412 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 SLC23A3Q6PIS1 610 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 LRFN4Q6PJG9 635 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 SHISA5Q8N114 240 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PLPPR2Q96GM1 343 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 CCDC120Q96HB5 630 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PPP1R16BQ96T49 567 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 WNT10AQ9GZT5 417 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PODXL2Q9NZ53 605 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PCDHB5Q9Y5E4 795 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 PRR36Q9H6K5 1346 aa4.44□□□□□ -1.7
ATRX-205ENST00000479487 DYNC1LI2O43237 492 aaPredicted RBP4.43□□□□□ -1.7
ATRX-205ENST00000479487 GREM1O60565 184 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 RECKO95980 971 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 HCLS1P14317 486 aaPredicted RBP4.43□□□□□ -1.7
ATRX-205ENST00000479487 FANCCQ00597 558 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 SEPT6Q14141 434 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 AOC3Q16853 763 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 PPM1JQ5JR12 505 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 WIPI1Q5MNZ9 446 aaPredicted RBP4.43□□□□□ -1.7
ATRX-205ENST00000479487 DIEXFQ68CQ4 756 aaKnown RBP4.43□□□□□ -1.7
ATRX-205ENST00000479487 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.43□□□□□ -1.7
ATRX-205ENST00000479487 NFXL1Q6ZNB6 911 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 HS2ST1Q7LGA3 356 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 SPRED2Q7Z698 418 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 RELL1Q8IUW5 271 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATRX-205ENST00000479487 ELMO3Q96BJ8 720 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 TOX2Q96NM4 488 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 BACH2Q9BYV9 841 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 LGR6Q9HBX8 967 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 ADAM30Q9UKF2 790 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 TLR6Q9Y2C9 796 aa4.43□□□□□ -1.7
ATRX-205ENST00000479487 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 B8ZZF3 427 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 SCAMP3O14828 347 aaKnown RBP4.42□□□□□ -1.7
ATRX-205ENST00000479487 CENPBP07199 599 aaPredicted RBP4.42□□□□□ -1.7
ATRX-205ENST00000479487 CD8BP10966 210 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 LMNB1P20700 586 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 AFMP43652 599 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 MPP2Q14168 576 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 ZNF648Q5T619 568 aaPredicted RBP4.42□□□□□ -1.7
ATRX-205ENST00000479487 FAM196AQ6ZSG2 479 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 PLD6Q8N2A8 252 aaKnown RBP4.42□□□□□ -1.7
ATRX-205ENST00000479487 ZSCAN18Q8TBC5 510 aaPredicted RBP4.42□□□□□ -1.7
ATRX-205ENST00000479487 ZNF507Q8TCN5 953 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 PICK1Q9NRD5 415 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 KBTBD4Q9NVX7 518 aa4.42□□□□□ -1.7
ATRX-205ENST00000479487 LRRC10BA6NIK2 292 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 IGF2BP3O00425 579 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATRX-205ENST00000479487 LRIG2O94898 1065 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 PF4P02776 101 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 CEACAM5P06731 702 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 ZNF865P0CJ78 1059 aaPredicted RBP4.41□□□□□ -1.7
ATRX-205ENST00000479487 GBP2P32456 591 aaPredicted RBP4.41□□□□□ -1.7
ATRX-205ENST00000479487 ZNF76P36508 570 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 BNIP3Q12983 259 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 MAP3K11Q16584 847 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 TMEM201Q5SNT2 666 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 C22orf34Q6ZV56 151 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 CDC37L1Q7L3B6 337 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 C12orf40Q86WS4 652 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 MRPL41Q8IXM3 137 aaKnown RBP4.41□□□□□ -1.7
ATRX-205ENST00000479487 TMEM87AQ8NBN3 555 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 DUSP23Q9BVJ7 150 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 LMCD1Q9NZU5 365 aa4.41□□□□□ -1.7
ATRX-205ENST00000479487 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
ATRX-205ENST00000479487 ZCCHC6Q5VYS8 1495 aaKnown RBP4.41□□□□□ -1.7
ATRX-205ENST00000479487 UNCXA6NJT0 531 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 GNAT3A8MTJ3 354 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 F13A1P00488 732 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 RNASE1P07998 156 aaKnown RBP4.4□□□□□ -1.71
ATRX-205ENST00000479487 EIF4A3P38919 411 aaKnown RBP4.4□□□□□ -1.71
ATRX-205ENST00000479487 RAP1GAPP47736 663 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 CDK8P49336 464 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 PDE4BQ07343 736 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 CDK5R2Q13319 367 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 SLBPQ14493 270 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATRX-205ENST00000479487 KCNMB1Q16558 191 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 FBXL19Q6PCT2 694 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 LILRA6Q6PI73 481 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 BNC2Q6ZN30 1099 aaPredicted RBP4.4□□□□□ -1.71
ATRX-205ENST00000479487 ZNF574Q6ZN55 896 aaPredicted RBP4.4□□□□□ -1.71
ATRX-205ENST00000479487 FAM214BQ7L5A3 538 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 REC114Q7Z4M0 266 aa4.4□□□□□ -1.71
ATRX-205ENST00000479487 METTL16Q86W50 562 aaKnown RBP4.4□□□□□ -1.71
ATRX-205ENST00000479487 ZSWIM9Q86XI8 627 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms