RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 SSRP1Q08945 709 aaKnown RBP20.74■□□□□ 0.91
PDE8A-204ENST00000478717 PTPAQ15257 358 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 SRLQ86TD4 932 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 KCND1Q9NSA2 647 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 KCNJ14Q9UNX9 436 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 C4AP0C0L4 1744 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
PDE8A-204ENST00000478717 BICDL1Q6ZP65 573 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDE8A-204ENST00000478717 NACAP1Q9BZK3 213 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 DOT1LQ8TEK3 1739 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 BTBD18B2RXH4 712 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 H3BQF6 201 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 CYP7A1P22680 504 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 SYKP43405 635 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 SPECC1Q5M775 1068 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 KRT23Q9C075 422 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 CNNM2Q9H8M5 875 aa20.73■□□□□ 0.91
PDE8A-204ENST00000478717 TRIM65Q6PJ69 517 aa20.72■□□□□ 0.91
PDE8A-204ENST00000478717 NUP133Q8WUM0 1156 aa20.72■□□□□ 0.91
PDE8A-204ENST00000478717 DDX60Q8IY21 1712 aaKnown RBP20.72■□□□□ 0.91
PDE8A-204ENST00000478717 ERFEQ4G0M1 354 aa20.72■□□□□ 0.91
PDE8A-204ENST00000478717 PSDA5PKW4 1024 aaPredicted RBP20.71■□□□□ 0.91
PDE8A-204ENST00000478717 WTAPQ15007 396 aa20.71■□□□□ 0.91
PDE8A-204ENST00000478717 RAI14Q9P0K7 980 aa20.71■□□□□ 0.91
PDE8A-204ENST00000478717 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
PDE8A-204ENST00000478717 MYH14Q7Z406 1995 aaKnown RBP20.71■□□□□ 0.91
PDE8A-204ENST00000478717 ZSWIM4Q9H7M6 989 aa20.71■□□□□ 0.91
PDE8A-204ENST00000478717 STAG1Q8WVM7 1258 aa20.7■□□□□ 0.9
PDE8A-204ENST00000478717 CDCA7Q9BWT1 371 aaPredicted RBP20.7■□□□□ 0.9
PDE8A-204ENST00000478717 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
PDE8A-204ENST00000478717 COL4A1P02462 1669 aa20.7■□□□□ 0.9
PDE8A-204ENST00000478717 FMNL1O95466 1100 aaPredicted RBP20.7■□□□□ 0.9
PDE8A-204ENST00000478717 PNOCQ13519 176 aa20.7■□□□□ 0.9
PDE8A-204ENST00000478717 SECISBP2LQ93073 1101 aaKnown RBP20.7■□□□□ 0.9
PDE8A-204ENST00000478717 IFNAR1P17181 557 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 GNAT2P19087 354 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 NLRP12P59046 1061 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 LRP5O75197 1615 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 PPP6R2O75170 966 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
PDE8A-204ENST00000478717 PPARAQ07869 468 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 RTN1Q16799 776 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 PARD6BQ9BYG5 372 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 CYP2D7A0A087X1C5 515 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 ERICH2A1L162 156 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
PDE8A-204ENST00000478717 GOLGA5Q8TBA6 731 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 HPSEQ9Y251 543 aa20.69■□□□□ 0.9
PDE8A-204ENST00000478717 ROBO1Q9Y6N7 1651 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 EFCAB8A8MWE9 144 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 ATP2B1P20020 1258 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 ICE2Q659A1 982 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 PACS2Q86VP3 889 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 DRC1Q96MC2 740 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 FUT8Q9BYC5 575 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 CWC15Q9P013 229 aaKnown RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 ATP1A3P13637 1013 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 TOB1P50616 345 aaPredicted RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 GRIN1Q05586 938 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 NR5A1Q13285 461 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 NCAPHQ15003 741 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 ANKRD18AQ8IVF6 992 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 NOSTRINQ8IVI9 506 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 CCDC150Q8NCX0 1101 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 IMPACTQ9P2X3 320 aa20.68■□□□□ 0.9
PDE8A-204ENST00000478717 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
PDE8A-204ENST00000478717 ARFGAP3Q9NP61 516 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 PRDM1O75626 825 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 MMP1P03956 469 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 FOXP4Q8IVH2 680 aaPredicted RBP20.67■□□□□ 0.9
PDE8A-204ENST00000478717 CCDC24Q8N4L8 307 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 FANCBQ8NB91 859 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 WDR24Q96S15 920 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 VPS18Q9P253 973 aa20.67■□□□□ 0.9
PDE8A-204ENST00000478717 FOXN1O15353 648 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 SKIDA1Q1XH10 827 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 TRIM22Q8IYM9 498 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 CRACR2BQ8N4Y2 399 aaPredicted RBP20.66■□□□□ 0.9
PDE8A-204ENST00000478717 UBAC1Q9BSL1 405 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 PLEKHA4Q9H4M7 779 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.66■□□□□ 0.9
PDE8A-204ENST00000478717 hCG_1642624A0A1W2PR95 340 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 MCM6Q14566 821 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 RESP18Q5W5W9 173 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 ZNF654Q8IZM8 581 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 LINC00116Q8NCU8 138 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
PDE8A-204ENST00000478717 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 PHLPP2Q6ZVD8 1323 aa20.66■□□□□ 0.9
PDE8A-204ENST00000478717 ACTN2P35609 894 aa20.65■□□□□ 0.9
PDE8A-204ENST00000478717 PTF1AQ7RTS3 328 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms