RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SYTL4Q96C24 671 aaPredicted RBP15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 ACBD3Q9H3P7 528 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 RPS6KA5O75582 802 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 SEC31AO94979 1220 aaKnown RBP15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 IVLP07476 585 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 CDC27P30260 824 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 PIP4K2AP48426 406 aaPredicted RBP15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 ZC3H6P61129 1189 aaKnown RBP15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 WHAMMP3Q1A5X7 153 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 TAF7LQ5H9L4 462 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 NFXL1Q6ZNB6 911 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 DHX58Q96C10 678 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 CLIC6Q96NY7 704 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 PYM1Q9BRP8 204 aaKnown RBP15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 SLC12A7Q9Y666 1083 aa15.41■□□□□ 0.06
HLA-DMA-208ENST00000477541 POLR3GO15318 223 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 DEXIO95424 95 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 PBX1P40424 430 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 NKX1-1Q15270 411 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ADGRG1Q9Y653 693 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ANKRD36CQ5JPF3 1778 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ACTN4O43707 911 aaKnown RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 RANBP6O60518 1105 aaKnown RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 BAG6P46379 1132 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 AIFM3Q96NN9 605 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 TEX13AQ9BXU3 409 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
HLA-DMA-208ENST00000477541 MCM3P25205 808 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 FMR1Q06787 632 aaKnown RBP eCLIP15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 SPAG1Q07617 926 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 RAD51AP2Q09MP3 1159 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 SCARF1Q14162 830 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 ZSCAN26Q16670 478 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 SEPT12Q8IYM1 358 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 PHKBQ93100 1093 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 RIPOR2Q9Y4F9 1068 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 MYH6P13533 1939 aa15.39■□□□□ 0.05
HLA-DMA-208ENST00000477541 CTAGE9A4FU28 777 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 POLR2DO15514 142 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 MFAP3LO75121 409 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 GNAT2P19087 354 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 MCAMP43121 646 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 SERTAD1Q9UHV2 236 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 SYNRGQ9UMZ2 1314 aa15.38■□□□□ 0.05
HLA-DMA-208ENST00000477541 B4E1Z4 1266 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 XBP1P17861 261 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 ACTN2P35609 894 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 BEND6Q5SZJ8 279 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 APTXQ7Z2E3 356 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 ZBTB3Q9H5J0 574 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 ADAM21Q9UKJ8 722 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 PDE6AP16499 860 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 RTN1Q16799 776 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 LEKR1Q6ZMV7 388 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 KRT27Q7Z3Y8 459 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 FAM177A1Q8N128 213 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 IGSF22Q8N9C0 903 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 NEK11Q8NG66 645 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 STAG1Q8WVM7 1258 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 STRBPQ96SI9 672 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 VIPAS39Q9H9C1 493 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 MRPL44Q9H9J2 332 aaKnown RBP15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 MED4Q9NPJ6 270 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
HLA-DMA-208ENST00000477541 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
HLA-DMA-208ENST00000477541 APPP05067 770 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms