RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ADMP35318 185 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 SOX9P48436 509 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
TARDBP-208ENST00000477447 NFIAQ12857 509 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 COL9A2Q14055 689 aaPredicted RBP5.33□□□□□ -1.56
TARDBP-208ENST00000477447 TMEM201Q5SNT2 666 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 RNF43Q68DV7 783 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 OVOS1Q6IE37 1185 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 SEZ6L2Q6UXD5 910 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 VPS37DQ86XT2 251 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 MRPL41Q8IXM3 137 aaKnown RBP5.33□□□□□ -1.56
TARDBP-208ENST00000477447 TOP6BLQ8N6T0 577 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 MIPEPQ99797 713 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 DBNDD2Q9BQY9 259 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 FOXQ1Q9C009 403 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 C1GALT1Q9NS00 363 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
TARDBP-208ENST00000477447 UPK3BL1B0FP48 263 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 UPK3BL2E5RIL1 263 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 GSC2O15499 205 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
TARDBP-208ENST00000477447 IGLV1-40P01703 118 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 FAM87AP0C7U9 286 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 IMPDH2P12268 514 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 CAP2P40123 477 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 ARID5AQ03989 594 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 SLC6A19Q695T7 634 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 ZAR1Q86SH2 424 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 MCATQ8IVS2 390 aaKnown RBP5.32□□□□□ -1.56
TARDBP-208ENST00000477447 CPLX3Q8WVH0 158 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 SRRTQ9BXP5 876 aaKnown RBP5.32□□□□□ -1.56
TARDBP-208ENST00000477447 SEMA6BQ9H3T3 888 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 ANTXR1Q9H6X2 564 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 GMIPQ9P107 970 aa5.32□□□□□ -1.56
TARDBP-208ENST00000477447 FAM170BA6NMN3 283 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 CHURC1-FNTBB4DL54 471 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 SSBP05455 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
TARDBP-208ENST00000477447 RAG1P15918 1043 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 ARSHQ5FYA8 562 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 PHACTR4Q8IZ21 702 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 SHISA5Q8N114 240 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 SLC43A3Q8NBI5 491 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 GIMAP7Q8NHV1 300 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 TMEM40Q8WWA1 233 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 GATA6Q92908 595 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 PSMG3-AS1Q96PY0 264 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 CRBNQ96SW2 442 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.31□□□□□ -1.563e-6■□□□□ 10.1
TARDBP-208ENST00000477447 STRIP2Q9ULQ0 834 aa5.31□□□□□ -1.56
TARDBP-208ENST00000477447 SLC22A31A6NKX4 558 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 MEIS3P2A8K0S8 358 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 WDR64B1ANS9 1081 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 LEFTY1O75610 366 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 F13BP05160 661 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 FGRP09769 529 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
TARDBP-208ENST00000477447 LRRFIP1Q32MZ4 808 aaKnown RBP5.3□□□□□ -1.56
TARDBP-208ENST00000477447 ZNF765Q7L2R6 523 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 LSRQ86X29 649 aaPredicted RBP5.3□□□□□ -1.56
TARDBP-208ENST00000477447 SLFN12Q8IYM2 578 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 MFSD2AQ8NA29 543 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 ANAPC16Q96DE5 110 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 DUSP23Q9BVJ7 150 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
TARDBP-208ENST00000477447 SLITRK5O94991 958 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 POLR2BP30876 1174 aaKnown RBP5.29□□□□□ -1.56
TARDBP-208ENST00000477447 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 PRSS36Q5K4E3 855 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 LETMD1Q6P1Q0 360 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 NLRC3Q7RTR2 1065 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 MCF2L2Q86YR7 1114 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 CYB5D2Q8WUJ1 264 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 ATG4CQ96DT6 458 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 KIF2CQ99661 725 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 TANGO6Q9C0B7 1094 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 ATG3Q9NT62 314 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 MRVI1Q9Y6F6 885 aa5.29□□□□□ -1.56
TARDBP-208ENST00000477447 FAM86C2PA6NEL3 165 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 K7ELQ4 463 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-208ENST00000477447 NME1P15531 152 aaKnown RBP5.28□□□□□ -1.56
TARDBP-208ENST00000477447 CYP27C1Q4G0S4 372 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 OGFOD3Q6PK18 319 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 RUFY4Q6ZNE9 571 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 ZDHHC13Q8IUH4 622 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 BAHD1Q8TBE0 780 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-208ENST00000477447 SHDQ96IW2 340 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 METTL22Q9BUU2 404 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-208ENST00000477447 CNNM2Q9H8M5 875 aa5.28□□□□□ -1.56
TARDBP-208ENST00000477447 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
TARDBP-208ENST00000477447 EOMESO95936 686 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 GBP1P32455 592 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 ETV3P41162 512 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 GIPRP48546 466 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 CHMP4BP1P59074 171 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 SF3A1Q15459 793 aaKnown RBP5.27□□□□□ -1.57
TARDBP-208ENST00000477447 CDCP2Q5VXM1 449 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms