RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 NEK4P51957 841 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 TOB2Q14106 344 aaPredicted RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 TATDN1Q6P1N9 297 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 BLOC1S2Q6QNY1 142 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 MIGA2Q7L4E1 593 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 DHX32Q7L7V1 743 aaKnown RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 USP48Q86UV5 1035 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 NCOA7Q8NI08 942 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 ZC3H15Q8WU90 426 aaKnown RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
PGK1-204ENST00000477335 RNF41Q9H4P4 317 aaPredicted RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
PGK1-204ENST00000477335 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 IGKV6D-41A0A0C4DH26 115 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 PHF20L1A8MW92 1017 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 TRAF5O00463 557 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 LARGE1O95461 756 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 PSMA5P28066 241 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 AK2P54819 239 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 MAP1SQ66K74 1059 aaPredicted RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 RALYLQ86SE5 291 aaKnown RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 FOXP4Q8IVH2 680 aaPredicted RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 AMOTL1Q8IY63 956 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 IGDCC4Q8TDY8 1250 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 DCPSQ96C86 337 aaKnown RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 TOMM22Q9NS69 142 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 PDRG1Q9NUG6 133 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 CYP46A1Q9Y6A2 500 aa10.97□□□□□ -0.65
PGK1-204ENST00000477335 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
PGK1-204ENST00000477335 PAPPA2Q9BXP8 1791 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 PLIN4Q96Q06 1357 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 TBC1D12O60347 775 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 GDF11O95390 407 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
PGK1-204ENST00000477335 PCP11498 1178 aaKnown RBP10.96□□□□□ -0.65
PGK1-204ENST00000477335 TFAP4Q01664 338 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 PDE4BQ07343 736 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 SEC23AQ15436 765 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 RCSD1Q6JBY9 416 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 Q6ZUG5 572 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
PGK1-204ENST00000477335 PNMA8AQ86V59 439 aaPredicted RBP10.96□□□□□ -0.65
PGK1-204ENST00000477335 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 CRACR2BQ8N4Y2 399 aaPredicted RBP10.96□□□□□ -0.65
PGK1-204ENST00000477335 ESR2Q92731 530 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 CDCA5Q96FF9 252 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 AGXT2Q9BYV1 514 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 KRT23Q9C075 422 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.96□□□□□ -0.65
PGK1-204ENST00000477335 LY9Q9HBG7 655 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 MKNK2Q9HBH9 465 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 PPP2R3BQ9Y5P8 575 aa10.96□□□□□ -0.65
PGK1-204ENST00000477335 WDR19Q8NEZ3 1342 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 KIF3CO14782 793 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 MCM5P33992 734 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 TRDNQ13061 729 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 CCDC84Q86UT8 332 aaPredicted RBP10.95□□□□□ -0.66
PGK1-204ENST00000477335 LDHDQ86WU2 507 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 ENAHQ8N8S7 591 aaPredicted RBP10.95□□□□□ -0.66
PGK1-204ENST00000477335 NEDD1Q8NHV4 660 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 ALDH8A1Q9H2A2 487 aaPredicted RBP10.95□□□□□ -0.66
PGK1-204ENST00000477335 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
PGK1-204ENST00000477335 BRPF3Q9ULD4 1205 aa10.95□□□□□ -0.66
PGK1-204ENST00000477335 TNKSO95271 1327 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 DTNBO60941 627 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
PGK1-204ENST00000477335 INPP5BP32019 993 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 NOVP48745 357 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 CERKLQ49MI3 558 aaPredicted RBP10.94□□□□□ -0.66
PGK1-204ENST00000477335 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 RAB11FIP4Q86YS3 637 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
PGK1-204ENST00000477335 FBXL16Q8N461 479 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 BRF1Q92994 677 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 SNX21Q969T3 373 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
PGK1-204ENST00000477335 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 TPCN1Q9ULQ1 816 aa10.94□□□□□ -0.66
PGK1-204ENST00000477335 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
PGK1-204ENST00000477335 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
PGK1-204ENST00000477335 GH2P01242 217 aa10.93□□□□□ -0.66
PGK1-204ENST00000477335 TSPY3P0CV98 308 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms