RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 ISM2Q6H9L7 571 aa17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 SHC4Q6S5L8 630 aa17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 RASGRP2Q7LDG7 609 aa17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 NAPGQ99747 312 aaPredicted RBP17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 FAM204AQ9H8W3 233 aa17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
CLSTN1-205ENST00000477264 KIF28PB7ZC32 967 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 FECHP22830 423 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 TCIRG1Q13488 830 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 ZFP91Q96JP5 570 aaPredicted RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 DESI2Q9BSY9 194 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 A0A1B0GTH6 734 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 VSNL1P62760 191 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 TFCP2Q12800 502 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 PTPAQ15257 358 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 NT5DC1Q5TFE4 455 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 FOXR1Q6PIV2 292 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 PTF1AQ7RTS3 328 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 DZIP3Q86Y13 1208 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 NFE2L3Q9Y4A8 694 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 PCDHA5Q9Y5H7 936 aa17.32■□□□□ 0.36
CLSTN1-205ENST00000477264 MYH7P12883 1935 aa17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 CDKL5O76039 1030 aa17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
CLSTN1-205ENST00000477264 RNF40O75150 1001 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 NR1I3Q14994 352 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 ZNF569Q5MCW4 686 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 MYH8P13535 1937 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 SHOX2O60902 331 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 ERCC5P28715 1186 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 MARCKSP29966 332 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 PTPN12Q05209 780 aaKnown RBP17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 RPAINQ86UA6 219 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 KCNH3Q9ULD8 1083 aa17.3■□□□□ 0.36
CLSTN1-205ENST00000477264 MAST3O60307 1309 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 KLF18A0A0U1RQI7 1052 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 CCDC148Q8NFR7 591 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 LZTFL1Q9NQ48 299 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 MAN1B1Q9UKM7 699 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 RREB1Q92766 1687 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 SOWAHDA6NJG2 315 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 SEMA3EO15041 775 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 PDE4BQ07343 736 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 KANK3Q6NY19 840 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 MYH14Q7Z406 1995 aaKnown RBP17.29■□□□□ 0.36
CLSTN1-205ENST00000477264 ITIH6Q6UXX5 1313 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 ATXN2Q99700 1313 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 H7C1W4 665 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 PLCD1P51178 756 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 MORC3Q14149 939 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 POSTNQ15063 836 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 RAD9BQ6WBX8 426 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 RPGRIP1Q96KN7 1286 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 NUP98P52948 1817 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 PRC1O43663 620 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 MFAP3LO75121 409 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
CLSTN1-205ENST00000477264 GSCP56915 257 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms