RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 DDX60LQ5H9U9 1706 aaKnown RBP23.13■■□□□ 1.29
GMDS-204ENST00000476972 MYH1P12882 1939 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 MYH7P12883 1935 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 TREML2Q5T2D2 321 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 CERS3Q8IU89 383 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 UNC93B1Q9H1C4 597 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 PAG1Q9NWQ8 432 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 PTPRFP10586 1907 aa23.12■■□□□ 1.29
GMDS-204ENST00000476972 NAV1Q8NEY1 1877 aa23.11■■□□□ 1.29
GMDS-204ENST00000476972 TNPO2O14787 897 aaKnown RBP23.11■■□□□ 1.29
GMDS-204ENST00000476972 ELNP15502 786 aa23.11■■□□□ 1.29
GMDS-204ENST00000476972 SPP2Q13103 211 aa23.11■■□□□ 1.29
GMDS-204ENST00000476972 SLC9C2Q5TAH2 1124 aa23.11■■□□□ 1.29
GMDS-204ENST00000476972 U2AF1L4Q8WU68 220 aaKnown RBP23.11■■□□□ 1.29
GMDS-204ENST00000476972 HAUS7Q99871 368 aa23.11■■□□□ 1.29
GMDS-204ENST00000476972 DHX36Q9H2U1 1008 aaKnown RBP23.11■■□□□ 1.29
GMDS-204ENST00000476972 RRP1BQ14684 758 aaKnown RBP23.1■■□□□ 1.29
GMDS-204ENST00000476972 ANKRD13CQ8N6S4 541 aa23.1■■□□□ 1.29
GMDS-204ENST00000476972 RIOK1Q9BRS2 568 aaKnown RBP23.1■■□□□ 1.29
GMDS-204ENST00000476972 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
GMDS-204ENST00000476972 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
GMDS-204ENST00000476972 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
GMDS-204ENST00000476972 ZNF532Q9HCE3 1301 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 SGPL1O95470 568 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 CAP2P40123 477 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
GMDS-204ENST00000476972 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 PXYLP1Q8TE99 480 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 PALD1Q9ULE6 856 aa23.09■■□□□ 1.29
GMDS-204ENST00000476972 MAGEB6P1A0A0J9YX57 407 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 TCRBV5S4A2TA0A5A2 114 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 INHAP05111 366 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 USP5P45974 858 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 IRF5Q13568 498 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 CHRDL2Q6WN34 429 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 DNAJC18Q9H819 358 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 ECHDC1Q9NTX5 307 aa23.08■■□□□ 1.29
GMDS-204ENST00000476972 HMGCS2P54868 508 aa23.07■■□□□ 1.28
GMDS-204ENST00000476972 COA7Q96BR5 231 aa23.07■■□□□ 1.28
GMDS-204ENST00000476972 HTATIP2Q9BUP3 242 aa23.07■■□□□ 1.28
GMDS-204ENST00000476972 PNMA3Q9UL41 463 aa23.07■■□□□ 1.28
GMDS-204ENST00000476972 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
GMDS-204ENST00000476972 HLA-DOAP06340 250 aa23.06■■□□□ 1.28
GMDS-204ENST00000476972 TSHZ3Q63HK5 1081 aa23.06■■□□□ 1.28
GMDS-204ENST00000476972 METTL16Q86W50 562 aaKnown RBP23.06■■□□□ 1.28
GMDS-204ENST00000476972 GPATCH3Q96I76 525 aa23.06■■□□□ 1.28
GMDS-204ENST00000476972 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
GMDS-204ENST00000476972 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
GMDS-204ENST00000476972 TFRCP02786 760 aaKnown RBP23.05■■□□□ 1.28
GMDS-204ENST00000476972 ADD2P35612 726 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 FAM110CQ1W6H9 321 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 CRACR2BQ8N4Y2 399 aaPredicted RBP23.05■■□□□ 1.28
GMDS-204ENST00000476972 DEFB118Q96PH6 123 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 TBC1D2Q9BYX2 928 aa23.05■■□□□ 1.28
GMDS-204ENST00000476972 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.05■■□□□ 1.28
GMDS-204ENST00000476972 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
GMDS-204ENST00000476972 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.28
GMDS-204ENST00000476972 TRIM34Q9BYJ4 488 aa23.04■■□□□ 1.28
GMDS-204ENST00000476972 ASCC2Q9H1I8 757 aaPredicted RBP23.04■■□□□ 1.28
GMDS-204ENST00000476972 RBM27Q9P2N5 1060 aaKnown RBP23.04■■□□□ 1.28
GMDS-204ENST00000476972 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
GMDS-204ENST00000476972 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
GMDS-204ENST00000476972 CHGBP05060 677 aa23.03■■□□□ 1.28
GMDS-204ENST00000476972 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
GMDS-204ENST00000476972 FOXP4Q8IVH2 680 aaPredicted RBP23.03■■□□□ 1.28
GMDS-204ENST00000476972 LCORLQ8N3X6 602 aa23.03■■□□□ 1.28
GMDS-204ENST00000476972 CRNKL1Q9BZJ0 848 aaKnown RBP23.03■■□□□ 1.28
GMDS-204ENST00000476972 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
GMDS-204ENST00000476972 JAG1P78504 1218 aa23.02■■□□□ 1.28
GMDS-204ENST00000476972 WDR18Q9BV38 432 aa23.02■■□□□ 1.28
GMDS-204ENST00000476972 AS3MTQ9HBK9 375 aa23.02■■□□□ 1.28
GMDS-204ENST00000476972 PAK6Q9NQU5 681 aaPredicted RBP23.02■■□□□ 1.28
GMDS-204ENST00000476972 HDAC1Q13547 482 aaPredicted RBP23.01■■□□□ 1.27
GMDS-204ENST00000476972 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
GMDS-204ENST00000476972 OTUD7AQ8TE49 926 aaPredicted RBP23.01■■□□□ 1.27
GMDS-204ENST00000476972 ARMT1Q9H993 441 aa23.01■■□□□ 1.27
GMDS-204ENST00000476972 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
GMDS-204ENST00000476972 MBD4O95243 580 aa23■■□□□ 1.27
GMDS-204ENST00000476972 GDF11O95390 407 aa23■■□□□ 1.27
GMDS-204ENST00000476972 CAPN2P17655 700 aa23■■□□□ 1.27
GMDS-204ENST00000476972 BACE1P56817 501 aa23■■□□□ 1.27
GMDS-204ENST00000476972 AAMPQ13685 434 aa23■■□□□ 1.27
GMDS-204ENST00000476972 UBE3CQ15386 1083 aa23■■□□□ 1.27
GMDS-204ENST00000476972 SDR42E1Q8WUS8 393 aa23■■□□□ 1.27
GMDS-204ENST00000476972 CRISPLD2Q9H0B8 497 aa23■■□□□ 1.27
GMDS-204ENST00000476972 EHD4Q9H223 541 aa23■■□□□ 1.27
GMDS-204ENST00000476972 SERPINB13Q9UIV8 391 aa23■■□□□ 1.27
GMDS-204ENST00000476972 SZT2Q5T011 3432 aa22.99■■□□□ 1.27
GMDS-204ENST00000476972 ASNSP08243 561 aa22.99■■□□□ 1.27
GMDS-204ENST00000476972 MTMR2Q13614 643 aa22.99■■□□□ 1.27
GMDS-204ENST00000476972 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
GMDS-204ENST00000476972 TTC41PQ6P2S7 1318 aa22.99■■□□□ 1.27
GMDS-204ENST00000476972 BAZ2AQ9UIF9 1905 aaKnown RBP22.98■■□□□ 1.27
GMDS-204ENST00000476972 PLCD1P51178 756 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 ZSCAN25Q6NSZ9 544 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 KBTBD3Q8NAB2 608 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 P2RX7Q99572 595 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms