RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TERF1P54274 439 aa10.28□□□□□ -0.76
CCDC66-216ENST00000476142 NFIXQ14938 502 aa10.28□□□□□ -0.76
CCDC66-216ENST00000476142 LONRF3Q496Y0 759 aa10.28□□□□□ -0.76
CCDC66-216ENST00000476142 CACTINQ8WUQ7 758 aaKnown RBP10.28□□□□□ -0.76
CCDC66-216ENST00000476142 MRFAP1L1Q96HT8 127 aa10.28□□□□□ -0.76
CCDC66-216ENST00000476142 RCAN1P53805 252 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 TPM4P67936 248 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 GRIN1Q05586 938 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.76
CCDC66-216ENST00000476142 HPSEQ9Y251 543 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 CACNA1SQ13698 1873 aa10.27□□□□□ -0.76
CCDC66-216ENST00000476142 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 TSPY2A6NKD2 308 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 USP5P45974 858 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 RBM6P78332 1123 aaKnown RBP10.27□□□□□ -0.77
CCDC66-216ENST00000476142 TIGD1Q96MW7 591 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.77
CCDC66-216ENST00000476142 FAM13BQ9NYF5 915 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 BTAF1O14981 1849 aa10.27□□□□□ -0.77
CCDC66-216ENST00000476142 LDHBP07195 334 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 GRAPQ13588 217 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 SPTY2D1Q68D10 685 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 PDILTQ8N807 584 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 CTCFLQ8NI51 663 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 RPGRQ92834 1020 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 FOXN1O15353 648 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 LMOD1P29536 600 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 KRT2P35908 639 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 PDE4BQ07343 736 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 PPP2R5BQ15173 497 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 KRBA2Q6ZNG9 492 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 ATP8A2Q9NTI2 1148 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 IFNKQ9P0W0 207 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 ECM29Q5VYK3 1845 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 DUOX1Q9NRD9 1551 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 SMTNL1A8MU46 457 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 POLR2DO15514 142 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 CALM1P0DP23 149 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 CALM2P0DP24 149 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 CALM3P0DP25 149 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 PCP11498 1178 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 TROAPQ12815 778 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 PKN1Q16512 942 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 SHISA4Q96DD7 197 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 C16orf45Q96MC5 204 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 FBXO2Q9UK22 296 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-216ENST00000476142 CEP131Q9UPN4 1083 aa10.26□□□□□ -0.77
CCDC66-216ENST00000476142 ZNF831Q5JPB2 1677 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 PDS5AQ29RF7 1337 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 BAZ2AQ9UIF9 1905 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 DDAH1O94760 285 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 OLFM4Q6UX06 510 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 LRRC8AQ8IWT6 810 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 SH3RF3Q8TEJ3 882 aaPredicted RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 DYNLL2Q96FJ2 89 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 BPIFA3Q9BQP9 254 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 XPO4Q9C0E2 1151 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 BRMS1Q9HCU9 246 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 LRRC4BQ9NT99 713 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 A0A1B0GUL6 1792 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 TRIM75PA6NK02 468 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 ORC4O43929 436 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 FGRP09769 529 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 GRIK5Q16478 980 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 TPD52L1Q16890 204 aaPredicted RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 EARS2Q5JPH6 523 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 TMTC3Q6ZXV5 915 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 ZNF804AQ7Z570 1209 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 GRAMD1CQ8IYS0 662 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 NOL10Q9BSC4 688 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 HOOK1Q9UJC3 728 aaKnown RBP10.25□□□□□ -0.77
CCDC66-216ENST00000476142 PCDHA5Q9Y5H7 936 aa10.25□□□□□ -0.77
CCDC66-216ENST00000476142 XDHP47989 1333 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 UFL1O94874 794 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 PTPREP23469 700 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 FUT2Q10981 343 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 PRR5LQ6MZQ0 368 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 TMC6Q7Z403 805 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 SRBD1Q8N5C6 995 aaKnown RBP10.24□□□□□ -0.77
CCDC66-216ENST00000476142 TSC1Q92574 1164 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 PHF20Q9BVI0 1012 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 CSRNP2Q9H175 543 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms