RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ASNSP08243 561 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 MOGSQ13724 837 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 KIF22Q14807 665 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 HAUS7Q99871 368 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 RIOK1Q9BRS2 568 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 MYH4Q9Y623 1939 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 LACTBP83111 547 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 CCDC84Q86UT8 332 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 DPF3Q92784 378 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 EHD4Q9H223 541 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 GINM1Q9NU53 330 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 SLC45A1Q9Y2W3 748 aa13.77□□□□□ -0.21
NUDCD3-206ENST00000475952 ADGRA2Q96PE1 1338 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 ADD2P35612 726 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 MTFR1Q15390 333 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 PROCA1Q8NCQ7 364 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 CPA4Q9UI42 421 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
NUDCD3-206ENST00000475952 GDF11O95390 407 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 GNRH1P01148 92 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 CYP2C8P10632 490 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 SPP2Q13103 211 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 LCORLQ8N3X6 602 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 AGTPBP1Q9UPW5 1226 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 EYSQ5T1H1 3165 aa13.75□□□□□ -0.21
NUDCD3-206ENST00000475952 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 TTC41PQ6P2S7 1318 aa13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 POLR3DP05423 398 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 CTGFP29279 349 aa13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 UBE3CQ15386 1083 aa13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 SDR42E1Q8WUS8 393 aa13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-206ENST00000475952 SOX1O00570 391 aaPredicted RBP13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 ERC2O15083 957 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 MBD4O95243 580 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 HMGCS2P54868 508 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 PRMT2P55345 433 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 AAMPQ13685 434 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 WDR18Q9BV38 432 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 TMOD4Q9NZQ9 345 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
NUDCD3-206ENST00000475952 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 BCRP11274 1271 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 GJA8P48165 433 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 BACE1P56817 501 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 MTMR2Q13614 643 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 KBTBD3Q8NAB2 608 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
NUDCD3-206ENST00000475952 C19orf81C9J6K1 198 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 USP17L10C9JJH3 530 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 GH2P01242 217 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 OSBPP22059 807 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 HOXD10P28358 340 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 PSMC4P43686 418 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 PLCD1P51178 756 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 FCGRTP55899 365 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 LRCH3Q96II8 777 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 SRRDQ9UH36 339 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 SWAP70Q9UH65 585 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms