RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.84
LMNB2-202ENST00000475819 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
LMNB2-202ENST00000475819 DDTLA6NHG4 134 aaPredicted RBP20.26■□□□□ 0.83
LMNB2-202ENST00000475819 ADCY3O60266 1144 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 ELNP15502 786 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 ZAP70P43403 619 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 CCDC84Q86UT8 332 aaPredicted RBP20.26■□□□□ 0.83
LMNB2-202ENST00000475819 U2AF1L4Q8WU68 220 aaKnown RBP20.26■□□□□ 0.83
LMNB2-202ENST00000475819 UNC93B1Q9H1C4 597 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 DDX4Q9NQI0 724 aaKnown RBP20.26■□□□□ 0.83
LMNB2-202ENST00000475819 PNMA3Q9UL41 463 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 AFG3L2Q9Y4W6 797 aa20.26■□□□□ 0.83
LMNB2-202ENST00000475819 CTNND1O60716 968 aaKnown RBP20.25■□□□□ 0.83
LMNB2-202ENST00000475819 FLT3LGP49771 235 aa20.25■□□□□ 0.83
LMNB2-202ENST00000475819 SH3BP5LQ7L8J4 393 aa20.25■□□□□ 0.83
LMNB2-202ENST00000475819 SNRKQ9NRH2 765 aa20.25■□□□□ 0.83
LMNB2-202ENST00000475819 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
LMNB2-202ENST00000475819 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 IGSF3O75054 1194 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 INHAP05111 366 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 SLURP2P0DP57 97 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 MECOMQ03112 1051 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 TBC1D9Q6ZT07 1266 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 ANKRD13CQ8N6S4 541 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 COA7Q96BR5 231 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 BACH2Q9BYV9 841 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.836e-6■■□□□ 14.1
LMNB2-202ENST00000475819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
LMNB2-202ENST00000475819 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 AGTPBP1Q9UPW5 1226 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 SLC45A1Q9Y2W3 748 aa20.24■□□□□ 0.83
LMNB2-202ENST00000475819 CYP2E1P05181 493 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-202ENST00000475819 GSTO1P78417 241 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 PI16Q6UXB8 463 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 RUFY2Q8WXA3 655 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 EDC3Q96F86 508 aaKnown RBP20.23■□□□□ 0.83
LMNB2-202ENST00000475819 RAI14Q9P0K7 980 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 LOC285556D6RIA3 1793 aa20.23■□□□□ 0.83
LMNB2-202ENST00000475819 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
LMNB2-202ENST00000475819 CHMLP26374 656 aa20.22■□□□□ 0.83
LMNB2-202ENST00000475819 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
LMNB2-202ENST00000475819 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
LMNB2-202ENST00000475819 RAD50Q92878 1312 aa20.22■□□□□ 0.83
LMNB2-202ENST00000475819 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
LMNB2-202ENST00000475819 DEFB118Q96PH6 123 aa20.21■□□□□ 0.83
LMNB2-202ENST00000475819 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
LMNB2-202ENST00000475819 EVI5O60447 810 aa20.2■□□□□ 0.82
LMNB2-202ENST00000475819 LDHCP07864 332 aa20.2■□□□□ 0.82
LMNB2-202ENST00000475819 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
LMNB2-202ENST00000475819 TREML2Q5T2D2 321 aa20.2■□□□□ 0.82
LMNB2-202ENST00000475819 TMED8Q6PL24 325 aaPredicted RBP20.2■□□□□ 0.82
LMNB2-202ENST00000475819 FAM163AQ96GL9 167 aaPredicted RBP20.2■□□□□ 0.82
LMNB2-202ENST00000475819 GPR75-ASB3A0A0A6YYF3 556 aa20.19■□□□□ 0.82
LMNB2-202ENST00000475819 SGPL1O95470 568 aa20.19■□□□□ 0.82
LMNB2-202ENST00000475819 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.82
LMNB2-202ENST00000475819 FAM110CQ1W6H9 321 aa20.19■□□□□ 0.82
LMNB2-202ENST00000475819 TEX11Q8IYF3 940 aa20.19■□□□□ 0.82
LMNB2-202ENST00000475819 PXYLP1Q8TE99 480 aa20.19■□□□□ 0.82
LMNB2-202ENST00000475819 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
LMNB2-202ENST00000475819 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
LMNB2-202ENST00000475819 HMGCS2P54868 508 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 RHBDL3P58872 404 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 SPP2Q13103 211 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 IRF5Q13568 498 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
LMNB2-202ENST00000475819 TRIM34Q9BYJ4 488 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 UPF2Q9HAU5 1272 aaKnown RBP20.18■□□□□ 0.82
LMNB2-202ENST00000475819 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
LMNB2-202ENST00000475819 LRP2BPQ9P2M1 347 aa20.18■□□□□ 0.82
LMNB2-202ENST00000475819 COL2A1P02458 1487 aaPredicted RBP20.18■□□□□ 0.82
LMNB2-202ENST00000475819 RNF113AO15541 343 aaKnown RBP20.17■□□□□ 0.82
LMNB2-202ENST00000475819 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
LMNB2-202ENST00000475819 UBE2Q1Q7Z7E8 422 aa20.17■□□□□ 0.82
LMNB2-202ENST00000475819 ZNF280CQ8ND82 737 aa20.17■□□□□ 0.82
LMNB2-202ENST00000475819 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
LMNB2-202ENST00000475819 AS3MTQ9HBK9 375 aa20.17■□□□□ 0.82
LMNB2-202ENST00000475819 TBC1D12O60347 775 aa20.16■□□□□ 0.82
LMNB2-202ENST00000475819 REC8O95072 547 aa20.16■□□□□ 0.82
LMNB2-202ENST00000475819 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
LMNB2-202ENST00000475819 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
LMNB2-202ENST00000475819 NSUN4Q96CB9 384 aaKnown RBP20.16■□□□□ 0.82
LMNB2-202ENST00000475819 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
LMNB2-202ENST00000475819 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 ADD2P35612 726 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 GCLCP48506 637 aaPredicted RBP20.15■□□□□ 0.82
LMNB2-202ENST00000475819 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
LMNB2-202ENST00000475819 IRX3P78415 501 aaPredicted RBP20.15■□□□□ 0.82
LMNB2-202ENST00000475819 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 SLC9C2Q5TAH2 1124 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 ZNF384Q8TF68 577 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 APPBP2Q92624 585 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
LMNB2-202ENST00000475819 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.15■□□□□ 0.82
LMNB2-202ENST00000475819 RANBP2P49792 3224 aaKnown RBP20.15■□□□□ 0.82
LMNB2-202ENST00000475819 CDK5RAP2Q96SN8 1893 aa20.14■□□□□ 0.81
LMNB2-202ENST00000475819 USP17L5A8MUK1 530 aa20.14■□□□□ 0.81
LMNB2-202ENST00000475819 SGSM2O43147 1006 aa20.14■□□□□ 0.81
LMNB2-202ENST00000475819 EPB41L2O43491 1005 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms