RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 CSRNP2Q9H175 543 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 LIN9Q5TKA1 542 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 C8orf74Q6P047 294 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 DCUN1D2Q6PH85 259 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 ANO3Q9BYT9 981 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 PARP10Q53GL7 1025 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 ZNF365Q70YC5 407 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 C10orf67Q8IYJ2 551 aa12.21□□□□□ -0.46
VAPB-204ENST00000475243 ALDH3A1P30838 453 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
VAPB-204ENST00000475243 ADCY7P51828 1080 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 USP19O94966 1318 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
VAPB-204ENST00000475243 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 KLHL7Q8IXQ5 586 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
VAPB-204ENST00000475243 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
VAPB-204ENST00000475243 PSMD6Q15008 389 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 LPIN2Q92539 896 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 STIM2Q9P246 746 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 ZBED4O75132 1171 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 TFAP4Q01664 338 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
VAPB-204ENST00000475243 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 POSTNQ15063 836 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 CLUL1Q15846 466 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
VAPB-204ENST00000475243 CCDC110Q8TBZ0 833 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 AZI2Q9H6S1 392 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 EXOC3O60645 756 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 ARID4AP29374 1257 aaPredicted RBP12.2□□□□□ -0.46
VAPB-204ENST00000475243 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
VAPB-204ENST00000475243 TRPM2O94759 1503 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 CD19P15391 556 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 EXOC7Q9UPT5 735 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 CUTAO60888 179 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 CARD6Q9BX69 1037 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 ZFYVE9O95405 1425 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 GTF2IP78347 998 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
VAPB-204ENST00000475243 MTX1Q13505 466 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 FMNL3Q8IVF7 1028 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 NAA25Q14CX7 972 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 CTTNBP2NLQ9P2B4 639 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 CEP104O60308 925 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 TNNI1P19237 187 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 TUBB4BP68371 445 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 NOX5Q96PH1 765 aa12.19□□□□□ -0.46
VAPB-204ENST00000475243 TRAPPC8Q9Y2L5 1435 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
VAPB-204ENST00000475243 PRPF6O94906 941 aaKnown RBP12.18□□□□□ -0.46
VAPB-204ENST00000475243 PTPROQ16827 1216 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 CABP7Q86V35 215 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 KBTBD3Q8NAB2 608 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 BSPRYQ5W0U4 402 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 STMN2Q93045 179 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 PNOCQ13519 176 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 TUBB4AP04350 444 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 TTC31Q49AM3 519 aaPredicted RBP12.18□□□□□ -0.46
VAPB-204ENST00000475243 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 STK10O94804 968 aaKnown RBP12.18□□□□□ -0.46
VAPB-204ENST00000475243 APBA3O96018 575 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 PPP1R2P41236 205 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.463e-10■■■■■ 27.6
VAPB-204ENST00000475243 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
VAPB-204ENST00000475243 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 USP40Q9NVE5 1235 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 ABL1P00519 1130 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 ATP5DP30049 168 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 ZNF131P52739 623 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 E7EWF7 191 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms