RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.34■■□□□ 1.497e-7■■■■■ 27.5
SH3D21-202ENST00000474766 CLCN6P51797 869 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 RPS8P62241 208 aaKnown RBP24.34■■□□□ 1.49
SH3D21-202ENST00000474766 TRDNQ13061 729 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 SOGA3Q5TF21 947 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 C8orf76Q96K31 380 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 STRBPQ96SI9 672 aaKnown RBP24.34■■□□□ 1.49
SH3D21-202ENST00000474766 SRRTQ9BXP5 876 aaKnown RBP24.34■■□□□ 1.49
SH3D21-202ENST00000474766 ORC3Q9UBD5 711 aaPredicted RBP24.34■■□□□ 1.49
SH3D21-202ENST00000474766 ATP6V0A2Q9Y487 856 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 ZMYM6O95789 1325 aa24.33■■□□□ 1.49
SH3D21-202ENST00000474766 ERCC6LQ2NKX8 1250 aa24.33■■□□□ 1.49
SH3D21-202ENST00000474766 IPO4Q8TEX9 1081 aaKnown RBP24.33■■□□□ 1.49
SH3D21-202ENST00000474766 ANGEL1Q9UNK9 670 aaKnown RBP24.33■■□□□ 1.49
SH3D21-202ENST00000474766 PNMA6AP0CW24 399 aaPredicted RBP24.32■■□□□ 1.48
SH3D21-202ENST00000474766 TEX35Q5T0J7 233 aa24.32■■□□□ 1.48
SH3D21-202ENST00000474766 SPATA5Q8NB90 893 aa24.32■■□□□ 1.48
SH3D21-202ENST00000474766 HELBQ8NG08 1087 aaPredicted RBP24.32■■□□□ 1.48
SH3D21-202ENST00000474766 CDC5LQ99459 802 aaKnown RBP24.32■■□□□ 1.48
SH3D21-202ENST00000474766 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.32■■□□□ 1.48
SH3D21-202ENST00000474766 PHLPP2Q6ZVD8 1323 aa24.32■■□□□ 1.48
SH3D21-202ENST00000474766 ZRANB2O95218 330 aaKnown RBP eCLIP24.32■■□□□ 1.487e-6■■■□□ 15
SH3D21-202ENST00000474766 TPM1P09493 284 aa24.32■■□□□ 1.48
SH3D21-202ENST00000474766 SLC5A1P13866 664 aa24.32■■□□□ 1.48
SH3D21-202ENST00000474766 CPLX1O14810 134 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 CYB5R4Q7L1T6 521 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 BRAPQ7Z569 592 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 ANKRD18AQ8IVF6 992 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 AOPEPQ8N6M6 819 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 DENND2AQ9ULE3 1009 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 DOCK2Q92608 1830 aa24.31■■□□□ 1.48
SH3D21-202ENST00000474766 ERICH4A6NGS2 130 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 SH2B2O14492 632 aaPredicted RBP24.3■■□□□ 1.48
SH3D21-202ENST00000474766 ME1P48163 572 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 TPM4P67936 248 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 ADALQ6DHV7 355 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 OTUD7BQ6GQQ9 843 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 SP8Q8IXZ3 490 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 LINC00301Q8NCQ3 95 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 NKX2-3Q8TAU0 364 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 ST7Q9NRC1 585 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 PCDHA7Q9UN72 937 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 A0A1W2PQ27 194 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 A0A1W2PQ64 194 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 A0A1W2PQD8 194 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 APPP05067 770 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 RASGRF1Q13972 1273 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 TAOK3Q9H2K8 898 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 POLR3EQ9NVU0 708 aa24.3■■□□□ 1.48
SH3D21-202ENST00000474766 SFPQP23246 707 aaKnown RBP eCLIP24.29■■□□□ 1.48
SH3D21-202ENST00000474766 PLA2G4AP47712 749 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 SYT10Q6XYQ8 523 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 RTKN2Q8IZC4 609 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 AIDAQ96BJ3 306 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 LTBP3Q9NS15 1303 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 DUOX1Q9NRD9 1551 aa24.29■■□□□ 1.48
SH3D21-202ENST00000474766 YEATS4O95619 227 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 IGHMBP2P38935 993 aaKnown RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 ARHGAP29Q52LW3 1261 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 CC2D2BQ6DHV5 1058 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 TMCO3Q6UWJ1 677 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 FSIP1Q8NA03 581 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 TMEM87BQ96K49 555 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 MPHOSPH8Q99549 860 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 BSDC1Q9NW68 430 aaPredicted RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 DICER1Q9UPY3 1922 aaKnown RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 PATL2C9JE40 543 aaKnown RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 ZBTB22O15209 634 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 ETF1P62495 437 aaKnown RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 MAP3K12Q12852 859 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 TMC4Q7Z404 712 aa24.28■■□□□ 1.48
SH3D21-202ENST00000474766 FMR1NBQ8N0W7 255 aaPredicted RBP24.28■■□□□ 1.48
SH3D21-202ENST00000474766 MYSM1Q5VVJ2 828 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 ARMCX5Q6P1M9 558 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 RAB11FIP4Q86YS3 637 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 TXLNBQ8N3L3 684 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 KCNG4Q8TDN1 519 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 IGDCC4Q8TDY8 1250 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 MRPS27Q92552 414 aaKnown RBP24.27■■□□□ 1.48
SH3D21-202ENST00000474766 TIAM2Q8IVF5 1701 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 MUM1L1Q5H9M0 696 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 C9orf131Q5VYM1 1079 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 APOA5Q6Q788 366 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 CLIC4Q9Y696 253 aa24.27■■□□□ 1.48
SH3D21-202ENST00000474766 KIF23Q02241 960 aaPredicted RBP24.26■■□□□ 1.47
SH3D21-202ENST00000474766 SGMS1Q86VZ5 419 aa24.26■■□□□ 1.47
SH3D21-202ENST00000474766 UBXN4Q92575 508 aa24.26■■□□□ 1.47
SH3D21-202ENST00000474766 UBXN6Q9BZV1 441 aa24.26■■□□□ 1.47
SH3D21-202ENST00000474766 EPB41L4AQ9HCS5 686 aaPredicted RBP24.26■■□□□ 1.47
SH3D21-202ENST00000474766 B4E1Z4 1266 aa24.25■■□□□ 1.47
SH3D21-202ENST00000474766 POLR3DP05423 398 aaPredicted RBP24.25■■□□□ 1.47
SH3D21-202ENST00000474766 LMNB1P20700 586 aa24.25■■□□□ 1.47
SH3D21-202ENST00000474766 METAP2P50579 478 aaKnown RBP eCLIP24.25■■□□□ 1.47
SH3D21-202ENST00000474766 HNRNPH2P55795 449 aaKnown RBP24.25■■□□□ 1.47
SH3D21-202ENST00000474766 IFNL3Q8IZI9 196 aa24.25■■□□□ 1.47
SH3D21-202ENST00000474766 MAGEB6Q8N7X4 407 aa24.25■■□□□ 1.47
SH3D21-202ENST00000474766 PSMD1Q99460 953 aa24.25■■□□□ 1.47
SH3D21-202ENST00000474766 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
SH3D21-202ENST00000474766 RNF181Q9P0P0 153 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms