RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 PDE4BQ07343 736 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 SUPT20HL1Q3ZLR7 823 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 CDCA5Q96FF9 252 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 SWAP70Q9UH65 585 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 TRAF5O00463 557 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 JAG1P78504 1218 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 KRT32Q14532 448 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 CYB5R4Q7L1T6 521 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 ZNF784Q8NCA9 323 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 JAKMIP1Q96N16 626 aaKnown RBP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 ZNF112Q9UJU3 913 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-206ENST00000474648 CDK5RAP2Q96SN8 1893 aa11.85□□□□□ -0.51
COL8A1-206ENST00000474648 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 DDX60LQ5H9U9 1706 aaKnown RBP11.84□□□□□ -0.51
COL8A1-206ENST00000474648 B4E1Z4 1266 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-206ENST00000474648 CPA1P15085 419 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 AKR1B1P15121 316 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 ANTXR2P58335 489 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 RRP12Q5JTH9 1297 aaKnown RBP11.84□□□□□ -0.51
COL8A1-206ENST00000474648 ZNF444Q8N0Y2 327 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-206ENST00000474648 NCOA7Q8NI08 942 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 KRT23Q9C075 422 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 CNNM2Q9H8M5 875 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
COL8A1-206ENST00000474648 FOCADQ5VW36 1801 aa11.83□□□□□ -0.51
COL8A1-206ENST00000474648 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.51
COL8A1-206ENST00000474648 RANBP6O60518 1105 aaKnown RBP11.83□□□□□ -0.52
COL8A1-206ENST00000474648 KDM4AO75164 1064 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 PSMA5P28066 241 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 TFAP4Q01664 338 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-206ENST00000474648 CERKLQ49MI3 558 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-206ENST00000474648 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
COL8A1-206ENST00000474648 NEDD1Q8NHV4 660 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 ESR2Q92731 530 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 CCDC17Q96LX7 622 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 ZNF287Q9HBT7 754 aa11.83□□□□□ -0.52
COL8A1-206ENST00000474648 BAZ2AQ9UIF9 1905 aaKnown RBP11.83□□□□□ -0.52
COL8A1-206ENST00000474648 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
COL8A1-206ENST00000474648 CASTP20810 708 aaKnown RBP11.82□□□□□ -0.52
COL8A1-206ENST00000474648 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 CAP2P40123 477 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 NT5C2P49902 561 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 TRDNQ13061 729 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 DCAF15Q66K64 600 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 RUFY3Q7L099 469 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 CHST3Q7LGC8 479 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
COL8A1-206ENST00000474648 IL17RBQ9NRM6 502 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
COL8A1-206ENST00000474648 PRC1O43663 620 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 GDF11O95390 407 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 INPP5BP32019 993 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 MCM5P33992 734 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 NOVP48745 357 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 PRKG1Q13976 671 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 RABEP1Q15276 862 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 CST9Q5W186 159 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 RALYLQ86SE5 291 aaKnown RBP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 RBM46Q8TBY0 533 aaKnown RBP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 IGDCC4Q8TDY8 1250 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 TTC14Q96N46 770 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 MYH1P12882 1939 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
COL8A1-206ENST00000474648 WDR19Q8NEZ3 1342 aa11.81□□□□□ -0.52
COL8A1-206ENST00000474648 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms