RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
RPGR-206ENST00000474584 SLC4A4Q9Y6R1 1079 aa16.09■□□□□ 0.17
RPGR-206ENST00000474584 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.17
RPGR-206ENST00000474584 TAF3Q5VWG9 929 aa16.08■□□□□ 0.17
RPGR-206ENST00000474584 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.17
RPGR-206ENST00000474584 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.17
RPGR-206ENST00000474584 MYH2Q9UKX2 1941 aa16.08■□□□□ 0.17
RPGR-206ENST00000474584 CASQ1P31415 396 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 NR5A1Q13285 461 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
RPGR-206ENST00000474584 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 TRMT44Q8IYL2 757 aaKnown RBP16.08■□□□□ 0.16
RPGR-206ENST00000474584 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
RPGR-206ENST00000474584 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 UBAC1Q9BSL1 405 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 CARD6Q9BX69 1037 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.16
RPGR-206ENST00000474584 FANCGO15287 622 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
RPGR-206ENST00000474584 PLCD1P51178 756 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 GNG11P61952 73 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 FANCBQ8NB91 859 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 NUP133Q8WUM0 1156 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 ACTN4O43707 911 aaKnown RBP16.07■□□□□ 0.16
RPGR-206ENST00000474584 PRKAB2O43741 272 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 PNMA6AP0CW24 399 aaPredicted RBP16.07■□□□□ 0.16
RPGR-206ENST00000474584 XBP1P17861 261 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 BCL9O00512 1426 aa16.07■□□□□ 0.16
RPGR-206ENST00000474584 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 GRAMD1CQ8IYS0 662 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 CSRNP2Q9H175 543 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 CT47A1Q5JQC4 288 aaPredicted RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 CMTR1Q8N1G2 835 aaKnown RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 SPATA20Q8TB22 786 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
RPGR-206ENST00000474584 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
RPGR-206ENST00000474584 TOGARAM2Q6ZUX3 1019 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPGR-206ENST00000474584 MAP3K9P80192 1104 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 PPARAQ07869 468 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 WDR24Q96S15 920 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
RPGR-206ENST00000474584 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
RPGR-206ENST00000474584 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPGR-206ENST00000474584 A0A1B0GTH6 734 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 NR1I3Q14994 352 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 ESR2Q92731 530 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 MRFAP1Q9Y605 127 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 SYNRGQ9UMZ2 1314 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 PHLPP1O60346 1717 aa16.04■□□□□ 0.16
RPGR-206ENST00000474584 SLIT2O94813 1529 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 AKR1B15C9JRZ8 316 aaPredicted RBP16.03■□□□□ 0.16
RPGR-206ENST00000474584 SNAP23O00161 211 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 CCDC175P0C221 793 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 PPP2R3AQ06190 1150 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 DHX58Q96C10 678 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 PANX2Q96RD6 677 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 TNKSO95271 1327 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 ATP8B1O43520 1251 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 BMP15O95972 392 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 KRT2P35908 639 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
RPGR-206ENST00000474584 USP49Q70CQ1 688 aa16.03■□□□□ 0.16
RPGR-206ENST00000474584 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
RPGR-206ENST00000474584 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
RPGR-206ENST00000474584 BCAMP50895 628 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 PPFIBP1Q86W92 1011 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 MED15Q96RN5 788 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 LAMB2P55268 1798 aa16.02■□□□□ 0.16
RPGR-206ENST00000474584 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.15
RPGR-206ENST00000474584 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.15
RPGR-206ENST00000474584 FERMT2Q96AC1 680 aa16.02■□□□□ 0.15
RPGR-206ENST00000474584 KIFC2Q96AC6 838 aa16.02■□□□□ 0.15
RPGR-206ENST00000474584 DESI2Q9BSY9 194 aa16.02■□□□□ 0.15
RPGR-206ENST00000474584 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
RPGR-206ENST00000474584 SEC23AQ15436 765 aa16.01■□□□□ 0.15
RPGR-206ENST00000474584 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
RPGR-206ENST00000474584 KLHL10Q6JEL2 608 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms