RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBR3-208ENST00000474426 KRBA1A5PL33 1030 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 K7ELQ4 463 aaPredicted RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 FRAT2O75474 233 aaPredicted RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 SKAP2O75563 359 aaPredicted RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 NASPP49321 788 aaPredicted RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 MCL1Q07820 350 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 MAP2K5Q13163 448 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 GRM1Q13255 1194 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 GPR162Q16538 588 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 PROSER3Q2NL68 480 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 RNF20Q5VTR2 975 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 ZNF804AQ7Z570 1209 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 DZIP1Q86YF9 867 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 AADATQ8N5Z0 425 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 APPBP2Q92624 585 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 ARHGEF2Q92974 986 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 RBM33Q96EV2 1170 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 ZMAT2Q96NC0 199 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 ATP8A2Q9NTI2 1148 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 SPATS2LQ9NUQ6 558 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 CNTN3Q9P232 1028 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 SCRIBQ14160 1630 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 NEMFO60524 1076 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 TBCAO75347 108 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 RPSAP08865 295 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 FECHP22830 423 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 NEK3P51956 506 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 APBA1Q02410 837 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 TRIM28Q13263 835 aaKnown RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 MORC3Q14149 939 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 TNIP1Q15025 636 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 KAZNQ674X7 775 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 IL31Q6EBC2 164 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 CARNMT1Q8N4J0 409 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 C7orf57Q8NEG2 295 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 FAM76AQ8TAV0 307 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 POLMQ9NP87 494 aaPredicted RBP3.97□□□□□ -1.77
UBR3-208ENST00000474426 DDX21Q9NR30 783 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBR3-208ENST00000474426 DISC1Q9NRI5 854 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 KRT82Q9NSB4 513 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 POGKQ9P215 609 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
UBR3-208ENST00000474426 KLRG2A4D1S0 409 aaPredicted RBP3.96□□□□□ -1.77
UBR3-208ENST00000474426 LACTBL1A8MY62 500 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 MYO1CO00159 1063 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 ATP6V1G1O75348 118 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 CYP17A1P05093 508 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 KRT10P13645 584 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 S100A5P33763 92 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 ST13P50502 369 aaKnown RBP3.96□□□□□ -1.77
UBR3-208ENST00000474426 CCDC173Q0VFZ6 552 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 BNIP1Q12981 228 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 SLC4A10Q6U841 1118 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 PACS2Q86VP3 889 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 SMYD1Q8NB12 490 aa3.96□□□□□ -1.77
UBR3-208ENST00000474426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.96□□□□□ -1.77
UBR3-208ENST00000474426 A0A1B0GUL7 405 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 ENO4A6NNW6 628 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 NMT2O60551 498 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 USP2O75604 605 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 ATF3P18847 181 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 GALNSP34059 522 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 TCF7P36402 384 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 TTLL12Q14166 644 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 PUM3Q15397 648 aaKnown RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 MUM1L1Q5H9M0 696 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 CAPRIN2Q6IMN6 1127 aaKnown RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 SASS6Q6UVJ0 657 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 HOOK3Q86VS8 718 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 SPC24Q8NBT2 197 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 RNF214Q8ND24 703 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 GPT2Q8TD30 523 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 EZH1Q92800 747 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 LRRC45Q96CN5 670 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 KATNAL1Q9BW62 490 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 SLC5A4Q9NY91 659 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 SPG7Q9UQ90 795 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 TACC3Q9Y6A5 838 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 CGNL1Q0VF96 1302 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 FGRP09769 529 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 STAT3P40763 770 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 AP2B1P63010 937 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 STK3Q13188 491 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 BTG3Q14201 252 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 CCDC152Q4G0S7 254 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 RRP12Q5JTH9 1297 aaKnown RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 SH2D4BQ5SQS7 431 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 CCDC186Q7Z3E2 898 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 SLC44A2Q8IWA5 706 aaPredicted RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 SPERTQ8NA61 448 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 GMCL1Q96IK5 515 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 UPF2Q9HAU5 1272 aaKnown RBP3.96□□□□□ -1.78
UBR3-208ENST00000474426 ATP6V0A4Q9HBG4 840 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 STARD7Q9NQZ5 370 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 KCNQ5Q9NR82 932 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 GIMAP2Q9UG22 337 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 TSKSQ9UJT2 592 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 PCDHGC5Q9Y5F6 944 aa3.96□□□□□ -1.78
UBR3-208ENST00000474426 KDRP35968 1356 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms