RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PTH1RQ03431 593 aa9.08□□□□□ -0.96
CCDC93-207ENST00000474006 VPS53Q5VIR6 699 aa9.08□□□□□ -0.96
CCDC93-207ENST00000474006 CDC42EP5Q6NZY7 148 aa9.08□□□□□ -0.96
CCDC93-207ENST00000474006 KIAA1211Q6ZU35 1233 aa9.08□□□□□ -0.96
CCDC93-207ENST00000474006 SH3RF3Q8TEJ3 882 aaPredicted RBP9.08□□□□□ -0.96
CCDC93-207ENST00000474006 SLC4A4Q9Y6R1 1079 aa9.08□□□□□ -0.96
CCDC93-207ENST00000474006 CCDC171Q6TFL3 1326 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 FER1L6Q2WGJ9 1857 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 GSG1L2A8MUP6 293 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 BHMG1C9JSJ3 638 aaPredicted RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 WNT10BO00744 389 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 EIF5BO60841 1220 aaKnown RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 EGFRP00533 1210 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 GNAT2P19087 354 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 LMOD1P29536 600 aaPredicted RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 RHBDL3P58872 404 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 NBPF9Q3BBW0 867 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 TBC1D10BQ4KMP7 808 aaPredicted RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 TGFBRAP1Q8WUH2 860 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 ZBED3Q96IU2 234 aaPredicted RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 USP26Q9BXU7 913 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 CRNKL1Q9BZJ0 848 aaKnown RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 LSG1Q9H089 658 aaKnown RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
CCDC93-207ENST00000474006 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
CCDC93-207ENST00000474006 RAD50Q92878 1312 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 CACNA1SQ13698 1873 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 ARAP2Q8WZ64 1704 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 ARFGEF1Q9Y6D6 1849 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 POTECB2RU33 542 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 WDHD1O75717 1129 aaPredicted RBP9.06□□□□□ -0.96
CCDC93-207ENST00000474006 REC8O95072 547 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 FGAP02671 866 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 HIRAP54198 1017 aaPredicted RBP9.06□□□□□ -0.96
CCDC93-207ENST00000474006 QPCTQ16769 361 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 TEX11Q8IYF3 940 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 IFNL3Q8IZI9 196 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 SDR42E1Q8WUS8 393 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 MAP4K1Q92918 833 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 ADARB2Q9NS39 739 aaKnown RBP9.06□□□□□ -0.96
CCDC93-207ENST00000474006 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
CCDC93-207ENST00000474006 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 A0A1B0GUL6 1792 aa9.06□□□□□ -0.96
CCDC93-207ENST00000474006 CLRN2A0PK11 232 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 FOXP2O15409 715 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 MYO1BO43795 1136 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 TRAK2O60296 914 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 USP5P45974 858 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 CACNB3P54284 484 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 ALX1Q15699 326 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 KIF4BQ2VIQ3 1234 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 GIMAP6Q6P9H5 292 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 TRPM4Q8TD43 1214 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 NACAP1Q9BZK3 213 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 DCP1AQ9NPI6 582 aaPredicted RBP9.05□□□□□ -0.96
CCDC93-207ENST00000474006 ATP8A2Q9NTI2 1148 aa9.05□□□□□ -0.96
CCDC93-207ENST00000474006 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
CCDC93-207ENST00000474006 IQCA1LA6NCM1 817 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 RAD21O60216 631 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 FDX1P10109 184 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 EPHX2P34913 555 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 NFIAQ12857 509 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 PICALMQ13492 652 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 NECTIN1Q15223 517 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 USP50Q70EL3 339 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-207ENST00000474006 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 IDI2Q9BXS1 227 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 TAF1DQ9H5J8 278 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-207ENST00000474006 VEZTQ9HBM0 779 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 EPB41L4AQ9HCS5 686 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-207ENST00000474006 DDX4Q9NQI0 724 aaKnown RBP9.04□□□□□ -0.96
CCDC93-207ENST00000474006 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
CCDC93-207ENST00000474006 ASTN2O75129 1339 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-207ENST00000474006 AKAP11Q9UKA4 1901 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 USP17L21D6R901 530 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 VEGFAP15692 232 aaPredicted RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 TDO2P48775 406 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 TCP10Q12799 353 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 ANGEL2Q5VTE6 544 aaKnown RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 FKBP1CQ5VVH2 108 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 CTR9Q6PD62 1173 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 ZNF526Q8TF50 670 aaPredicted RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 NAPBQ9H115 298 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 TMOD2Q9NZR1 351 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms