RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PTCD2Q8WV60 388 aaKnown RBP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 AKAP2Q9Y2D5 859 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 KIAA0100Q14667 2235 aaKnown RBP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 ATRNL1Q5VV63 1379 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 A0A1B0GUL7 405 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 TK2O00142 265 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 TBC1D12O60347 775 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 ADORA1P30542 326 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 GCLCP48506 637 aaPredicted RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 GSTO1P78417 241 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 MAP3K10Q02779 954 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 SPP2Q13103 211 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 RASGRF1Q13972 1273 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 FAM110CQ1W6H9 321 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 TREML2Q5T2D2 321 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PROCA1Q8NCQ7 364 aaPredicted RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PAWRQ96IZ0 340 aaKnown RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 NEUROD6Q96NK8 337 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 API5Q9BZZ5 524 aaKnown RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 DDX4Q9NQI0 724 aaKnown RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 STAP2Q9UGK3 403 aa8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PA2G4Q9UQ80 394 aaKnown RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 PDS5AQ29RF7 1337 aaKnown RBP8.54□□□□□ -1.04
CKS1B-205ENST00000473344 GPR75-ASB3A0A0A6YYF3 556 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 SRGAP3O43295 1099 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 HMGCRP04035 888 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 NEFLP07196 543 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 LDHCP07864 332 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 FOXK1P85037 733 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 MECOMQ03112 1051 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 SLFN5Q08AF3 891 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 CCDC84Q86UT8 332 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 ZNF280CQ8ND82 737 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 XAGE2Q96GT9 111 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 NOL10Q9BSC4 688 aaKnown RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 OSBPL5Q9H0X9 879 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 AS3MTQ9HBK9 375 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 HMX1Q9NP08 348 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 RAI14Q9P0K7 980 aa8.53□□□□□ -1.04
CKS1B-205ENST00000473344 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 NOB1Q9ULX3 412 aaKnown RBP8.53□□□□□ -1.04
CKS1B-205ENST00000473344 MYH13Q9UKX3 1938 aa8.52□□□□□ -1.04
CKS1B-205ENST00000473344 UNC80Q8N2C7 3258 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 RFX7Q2KHR2 1363 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 DLL1O00548 723 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.05
CKS1B-205ENST00000473344 HMGCS2P54868 508 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 TFCP2Q12800 502 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 CCAR1Q8IX12 1150 aaKnown RBP8.52□□□□□ -1.05
CKS1B-205ENST00000473344 C7orf61Q8IZ16 206 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 TRIM34Q9BYJ4 488 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 AK9Q5TCS8 1911 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 DOCK2Q92608 1830 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 RPTORQ8N122 1335 aa8.52□□□□□ -1.05
CKS1B-205ENST00000473344 BAG3O95817 575 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 GNAI3P08754 354 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 CT47B1P0C2W7 299 aaPredicted RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 CAP2P40123 477 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 RHBDL3P58872 404 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 IRX3P78415 501 aaPredicted RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 TEX11Q8IYF3 940 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 SPATA5Q8NB90 893 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 DIS3LQ8TF46 1054 aaKnown RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 NSUN4Q96CB9 384 aaKnown RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 MEIS3Q99687 375 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 ASCC2Q9H1I8 757 aaPredicted RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 HMG20BQ9P0W2 317 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 LRP2BPQ9P2M1 347 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
CKS1B-205ENST00000473344 HERC5Q9UII4 1024 aaKnown RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 LAMA2P24043 3122 aaKnown RBP8.51□□□□□ -1.05
CKS1B-205ENST00000473344 ASNSP08243 561 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 CYP2B6P20813 491 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 MTMR2Q13614 643 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 CRACR2BQ8N4Y2 399 aaPredicted RBP8.5□□□□□ -1.05
CKS1B-205ENST00000473344 SOCS4Q8WXH5 440 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 CDCA7LQ96GN5 454 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 DHX36Q9H2U1 1008 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms