RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 USP5P45974 858 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 BACE1P56817 501 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.57
VTI1A-203ENST00000472892 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 MTFR1Q15390 333 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 ANKRD13CQ8N6S4 541 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
VTI1A-203ENST00000472892 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 GABRQQ9UN88 632 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 CDK5RAP2Q96SN8 1893 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 FOCADQ5VW36 1801 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 C19orf81C9J6K1 198 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 APBB1O00213 710 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
VTI1A-203ENST00000472892 GCLCP48506 637 aaPredicted RBP18.59■□□□□ 0.57
VTI1A-203ENST00000472892 FAM110CQ1W6H9 321 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 TATDN1Q6P1N9 297 aa18.59■□□□□ 0.57
VTI1A-203ENST00000472892 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
VTI1A-203ENST00000472892 TNPO2O14787 897 aaKnown RBP18.58■□□□□ 0.56
VTI1A-203ENST00000472892 FLT3LGP49771 235 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 MTMR2Q13614 643 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.56
VTI1A-203ENST00000472892 SLC9C2Q5TAH2 1124 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 SLAIN1Q8ND83 568 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 EHD4Q9H223 541 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 ZBTB21Q9ULJ3 1066 aa18.58■□□□□ 0.56
VTI1A-203ENST00000472892 GDF11O95390 407 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 HOXA7P31268 230 aaPredicted RBP18.57■□□□□ 0.56
VTI1A-203ENST00000472892 IRF5Q13568 498 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 TMOD4Q9NZQ9 345 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 ATAD5Q96QE3 1844 aa18.57■□□□□ 0.56
VTI1A-203ENST00000472892 LOC285556D6RIA3 1793 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 MAGEB6P1A0A0J9YX57 407 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 USP17L10C9JJH3 530 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 GOLIM4O00461 696 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 ADCY3O60266 1144 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 PDE6AP16499 860 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 UBXN2AP68543 259 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 PXYLP1Q8TE99 480 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 MGAMO43451 1857 aa18.56■□□□□ 0.56
VTI1A-203ENST00000472892 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 GJB1P08034 283 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 CCL5P13501 91 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 ATP5JP18859 108 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 COA7Q96BR5 231 aa18.55■□□□□ 0.56
VTI1A-203ENST00000472892 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
VTI1A-203ENST00000472892 BIN2Q9UBW5 565 aaPredicted RBP18.55■□□□□ 0.56
VTI1A-203ENST00000472892 ZNF532Q9HCE3 1301 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 GH2P01242 217 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 GJA8P48165 433 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 PLCD1P51178 756 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 SHISA4Q96DD7 197 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 P2RX7Q99572 595 aaKnown RBP18.54■□□□□ 0.56
VTI1A-203ENST00000472892 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 MORF4L1Q9UBU8 362 aa18.54■□□□□ 0.56
VTI1A-203ENST00000472892 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
VTI1A-203ENST00000472892 EDC3Q96F86 508 aaKnown RBP18.53■□□□□ 0.56
VTI1A-203ENST00000472892 CRNKL1Q9BZJ0 848 aaKnown RBP18.53■□□□□ 0.56
VTI1A-203ENST00000472892 BCL11AQ9H165 835 aa18.53■□□□□ 0.56
VTI1A-203ENST00000472892 PAG1Q9NWQ8 432 aa18.53■□□□□ 0.56
VTI1A-203ENST00000472892 GJD2Q9UKL4 321 aa18.53■□□□□ 0.56
VTI1A-203ENST00000472892 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
VTI1A-203ENST00000472892 ELNP15502 786 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 SHMT1P34896 483 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 CERKLQ49MI3 558 aaPredicted RBP18.52■□□□□ 0.56
VTI1A-203ENST00000472892 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 HAUS7Q99871 368 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 UNC93B1Q9H1C4 597 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 MYH1P12882 1939 aa18.52■□□□□ 0.56
VTI1A-203ENST00000472892 INHAP05111 366 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 HERVK_113P62684 666 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 GABPAQ06546 454 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 ABCB5Q2M3G0 1257 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 GCC1Q96CN9 775 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 C12orf42Q96LP6 360 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 LRRCC1Q9C099 1032 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 RBPJLQ9UBG7 517 aa18.51■□□□□ 0.55
VTI1A-203ENST00000472892 ADD2P35612 726 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 UBE2Q1Q7Z7E8 422 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 LCORLQ8N3X6 602 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 GPRC5AQ8NFJ5 357 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
VTI1A-203ENST00000472892 TXNRD2Q9NNW7 524 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 DCP1AQ9NPI6 582 aaPredicted RBP18.5■□□□□ 0.55
VTI1A-203ENST00000472892 MCM9Q9NXL9 1143 aa18.5■□□□□ 0.55
VTI1A-203ENST00000472892 SGPL1O95470 568 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 CAPN2P17655 700 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 USP14P54578 494 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 POTEEQ6S8J3 1075 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 SDR42E1Q8WUS8 393 aa18.49■□□□□ 0.55
VTI1A-203ENST00000472892 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.49■□□□□ 0.55
VTI1A-203ENST00000472892 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms