RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CDC27P30260 824 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 MPP2Q14168 576 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 TRIM67Q6ZTA4 783 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 SULF2Q8IWU5 870 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 ADCY4Q8NFM4 1077 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 WDR66Q8TBY9 1149 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 BRF1Q92994 677 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 PNMA5Q96PV4 448 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 AAASQ9NRG9 546 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 REV1Q9UBZ9 1251 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 SUSD2Q9UGT4 822 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 KLF15Q9UIH9 416 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 PPM1HQ9ULR3 514 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 TRIM33Q9UPN9 1127 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 ASXL2Q76L83 1435 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 SPINT1O43278 529 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 CBFA2T2O43439 604 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 DGAT1O75907 488 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 CD2BP2O95400 341 aaKnown RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 MT-CO1P00395 513 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 JMJD7P0C870 316 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 SMPD1P17405 629 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 PIN1Q13526 163 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 WIPI1Q5MNZ9 446 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 BRAPQ7Z569 592 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 C12orf40Q86WS4 652 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 CHPFQ8IZ52 775 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 CBARPQ8N350 705 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 ATG4CQ96DT6 458 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 ABHD17AQ96GS6 310 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 TMX4Q9H1E5 349 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 TRIM39Q9HCM9 518 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 TIMMDC1Q9NPL8 285 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 TMEM39AQ9NV64 488 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 ZDHHC3Q9NYG2 299 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 H2AFY2Q9P0M6 372 aaPredicted RBP3.49□□□□□ -1.85
XRN1-210ENST00000472697 ZNF180Q9UJW8 692 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 MINPP1Q9UNW1 487 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 PRDM2Q13029 1718 aa3.49□□□□□ -1.85
XRN1-210ENST00000472697 DCDC2CA8MYV0 355 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 WIPF1O43516 503 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 NEFLP07196 543 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 EPHA1P21709 976 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 ZNF165P49910 485 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 RNF144AP50876 292 aaPredicted RBP3.48□□□□□ -1.85
XRN1-210ENST00000472697 PRR20EP86478 221 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PRR20CP86479 221 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PRR20DP86480 221 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PRR20BP86481 221 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PRR20AP86496 221 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 ZNF252P-AS1Q0IIN9 211 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 GRM3Q14832 879 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 TMEM67Q5HYA8 995 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 LRFN4Q6PJG9 635 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 TMEM192Q8IY95 271 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 JPH3Q8WXH2 748 aaPredicted RBP3.48□□□□□ -1.85
XRN1-210ENST00000472697 CENPOQ9BU64 300 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 DNMT3LQ9UJW3 386 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PHLDB1Q86UU1 1377 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 GPR25O00155 361 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 GFRA2O00451 464 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 BNIP3LO60238 219 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 NBNO60934 754 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 DLGAP3O95886 979 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 ZSCAN20P17040 1043 aaPredicted RBP3.48□□□□□ -1.85
XRN1-210ENST00000472697 RXRBP28702 533 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 EPHB1P54762 984 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 MLC1Q15049 377 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 NKG7Q16617 165 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PTPN21Q16825 1174 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 ZSCAN1Q8NBB4 408 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 GPBAR1Q8TDU6 330 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 SLC7A3Q8WY07 619 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 SMOC1Q9H4F8 434 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 EHMT1Q9H9B1 1298 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 EFCC1Q9HA90 598 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 SLC5A4Q9NY91 659 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 FAM13BQ9NYF5 915 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 NDOR1Q9UHB4 597 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 TRAK1Q9UPV9 953 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 PLAAQ9Y263 795 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 LUC7L2Q9Y383 392 aaKnown RBP3.48□□□□□ -1.85
XRN1-210ENST00000472697 WDR97A6NE52 1622 aa3.48□□□□□ -1.85
XRN1-210ENST00000472697 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 PRAMEF27A3QJZ7 478 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 SLC22A31A6NKX4 558 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 A6NNZ2 444 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 EFSO43281 561 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 SOD2P04179 222 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 KRT18P05783 430 aaKnown RBP3.47□□□□□ -1.85
XRN1-210ENST00000472697 ITGAVP06756 1048 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 BMP2P12643 396 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ITGAEP38570 1179 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 SLC19A1P41440 591 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 PCBP2Q15366 365 aaKnown RBP eCLIP3.47□□□□□ -1.85
XRN1-210ENST00000472697 SV2CQ496J9 727 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 SPRYD7Q5W111 196 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 CEP135Q66GS9 1140 aa3.47□□□□□ -1.85
XRN1-210ENST00000472697 ILDR2Q71H61 639 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms