RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 MBD4O95243 580 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
CLRN1-205ENST00000472224 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 PI4K2BQ8TCG2 481 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
CLRN1-205ENST00000472224 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLRN1-205ENST00000472224 ALPK3Q96L96 1907 aa14.32□□□□□ -0.12
CLRN1-205ENST00000472224 VCANP13611 3396 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
CLRN1-205ENST00000472224 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
CLRN1-205ENST00000472224 FSD1Q9BTV5 496 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
CLRN1-205ENST00000472224 SPDYE5A6NIY4 337 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
CLRN1-205ENST00000472224 NUCB1Q02818 461 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 ERO1BQ86YB8 467 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
CLRN1-205ENST00000472224 PICK1Q9NRD5 415 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 PTPRFP10586 1907 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 SALL3Q9BXA9 1300 aa14.3□□□□□ -0.12
CLRN1-205ENST00000472224 PHIPQ8WWQ0 1821 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 EYSQ5T1H1 3165 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 CCL15-CCL14A0A0B4J2E2 113 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 A0A1W2PPC1 479 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 CTGFP29279 349 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 PDE1AP54750 535 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 CCL15Q16663 113 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 ZNF112Q9UJU3 913 aa14.29□□□□□ -0.12
CLRN1-205ENST00000472224 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
CLRN1-205ENST00000472224 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 GJA8P48165 433 aa14.28□□□□□ -0.12
CLRN1-205ENST00000472224 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 NOL9Q5SY16 702 aaKnown RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
CLRN1-205ENST00000472224 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
CLRN1-205ENST00000472224 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 HERC5Q9UII4 1024 aaKnown RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 SPTBN5Q9NRC6 3674 aaKnown RBP14.28□□□□□ -0.12
CLRN1-205ENST00000472224 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 PRKAB2O43741 272 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 TLR2O60603 784 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
CLRN1-205ENST00000472224 GTF2A2P52657 109 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 PPIL2Q13356 520 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.13
CLRN1-205ENST00000472224 APPBP2Q92624 585 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 HTATIP2Q9BUP3 242 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
CLRN1-205ENST00000472224 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.13
CLRN1-205ENST00000472224 STAP2Q9UGK3 403 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 SLC4A4Q9Y6R1 1079 aa14.27□□□□□ -0.13
CLRN1-205ENST00000472224 IRF6O14896 467 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 TBC1D12O60347 775 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 CTNND1O60716 968 aaKnown RBP14.26□□□□□ -0.13
CLRN1-205ENST00000472224 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-205ENST00000472224 GDF11O95390 407 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 PPATQ06203 517 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 SNAPC2Q13487 334 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 MGAMO43451 1857 aa14.26□□□□□ -0.13
CLRN1-205ENST00000472224 M0R2C6 588 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 GNRH1P01148 92 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 NEFLP07196 543 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 GJB1P08034 283 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 CYP2D6P10635 497 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 CETPP11597 493 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 CCL5P13501 91 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLRN1-205ENST00000472224 MAP3K10Q02779 954 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 Q7L0L9 218 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 EVI5LQ96CN4 794 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 TRIM47Q96LD4 638 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 DCP1AQ9NPI6 582 aaPredicted RBP14.25□□□□□ -0.13
CLRN1-205ENST00000472224 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 ZHX2Q9Y6X8 837 aa14.25□□□□□ -0.13
CLRN1-205ENST00000472224 TRIM75PA6NK02 468 aa14.24□□□□□ -0.13
CLRN1-205ENST00000472224 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
CLRN1-205ENST00000472224 GPAA1O43292 621 aa14.24□□□□□ -0.13
CLRN1-205ENST00000472224 PTPRAP18433 802 aa14.24□□□□□ -0.13
CLRN1-205ENST00000472224 CAP2P40123 477 aa14.24□□□□□ -0.13
CLRN1-205ENST00000472224 PLCD1P51178 756 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms