RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 USP17L21D6R901 530 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 LDHCP07864 332 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 TM4SF1P30408 202 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 GUCY1A2P33402 732 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 RFC4P35249 363 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 KRT2P35908 639 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.46
APLF-204ENST00000471727 DPCR1Q3MIW9 517 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.46
APLF-204ENST00000471727 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 CCDC150Q8NCX0 1101 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.46
APLF-204ENST00000471727 USP21Q9UK80 565 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 CACNA1SQ13698 1873 aa12.21□□□□□ -0.46
APLF-204ENST00000471727 MROH7-TTC4A0A0A0MT08 1334 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 KIF5BP33176 963 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 FUT2Q10981 343 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 TROAPQ12815 778 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 GRAPQ13588 217 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 CTCFLQ8NI51 663 aaPredicted RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 GRAPLQ8TC17 118 aaPredicted RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 CACTINQ8WUQ7 758 aaKnown RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 PDCL3Q9H2J4 239 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 DCP1AQ9NPI6 582 aaPredicted RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 FBXO2Q9UK22 296 aaPredicted RBP12.2□□□□□ -0.46
APLF-204ENST00000471727 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 A0A1B0GUL6 1792 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
APLF-204ENST00000471727 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 NPHP1O15259 732 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 BAG3O95817 575 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 TUBB4AP04350 444 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 KCNJ6P48051 423 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 GNAQP50148 359 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 MYL5Q02045 173 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 NT5DC1Q5TFE4 455 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 DZIP1Q86YF9 867 aaKnown RBP12.19□□□□□ -0.46
APLF-204ENST00000471727 STK11IPQ8N1F8 1099 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 MLKLQ8NB16 471 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 ANKS1AQ92625 1134 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 FERMT2Q96AC1 680 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 XDHP47989 1333 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 IRS2Q9Y4H2 1338 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 KIF2AO00139 706 aaPredicted RBP12.19□□□□□ -0.46
APLF-204ENST00000471727 PPP4CP60510 307 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 NCAPHQ15003 741 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 PKN1Q16512 942 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 DGKHQ86XP1 1220 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 CLIC6Q96NY7 704 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
APLF-204ENST00000471727 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
APLF-204ENST00000471727 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 SMC2O95347 1197 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 LDHBP07195 334 aaKnown RBP12.18□□□□□ -0.46
APLF-204ENST00000471727 MDM2Q00987 491 aaPredicted RBP12.18□□□□□ -0.46
APLF-204ENST00000471727 LRMPQ12912 555 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 TCP11L1Q9NUJ3 509 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
APLF-204ENST00000471727 COL4A1P02462 1669 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 BIN1O00499 593 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 CCP110O43303 1012 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 SKILP12757 684 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 CALML3P27482 149 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 FANCCQ00597 558 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 POSTNQ15063 836 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 C17orf53Q8N3J3 647 aaPredicted RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 ERCC4Q92889 916 aaPredicted RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
APLF-204ENST00000471727 V9GY48 417 aaPredicted RBP12.17□□□□□ -0.46
APLF-204ENST00000471727 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
APLF-204ENST00000471727 ATP2B4P23634 1241 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 PRDX5P30044 214 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
APLF-204ENST00000471727 KCNQ4P56696 695 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms