RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 DHX36Q9H2U1 1008 aaKnown RBP14□□□□□ -0.17
LINC00880-201ENST00000471357 GOLGA8AA7E2F4 631 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 RXRAP19793 462 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 RPS12P25398 132 aaKnown RBP13.99□□□□□ -0.17
LINC00880-201ENST00000471357 MMP14P50281 582 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 RCAN1P53805 252 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 TCP10Q12799 353 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 NBR1Q14596 966 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 ZFPM1Q8IX07 1006 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 TMOD2Q9NZR1 351 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 SERPINB13Q9UIV8 391 aa13.99□□□□□ -0.17
LINC00880-201ENST00000471357 NMT2O60551 498 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 ENTPD3O75355 529 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 ADD1P35611 737 aaKnown RBP13.98□□□□□ -0.17
LINC00880-201ENST00000471357 FOXD4L5Q5VV16 416 aaPredicted RBP13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CLEC17AQ6ZS10 378 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 FOXD4L4Q8WXT5 416 aaPredicted RBP13.98□□□□□ -0.17
LINC00880-201ENST00000471357 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 ZSCAN22P10073 491 aaPredicted RBP13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CDC27P30260 824 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CCDC144CPQ8IYA2 1237 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 EHD4Q9H223 541 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 NID2Q14112 1375 aa13.98□□□□□ -0.17
LINC00880-201ENST00000471357 CDKL5O76039 1030 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 LMNB1P20700 586 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 MCM4P33991 863 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
LINC00880-201ENST00000471357 NEDD1Q8NHV4 660 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 NUP133Q8WUM0 1156 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 IL17RBQ9NRM6 502 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
LINC00880-201ENST00000471357 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
LINC00880-201ENST00000471357 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 CLRN2A0PK11 232 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 DDTLA6NHG4 134 aaPredicted RBP13.97□□□□□ -0.17
LINC00880-201ENST00000471357 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 RTN1Q16799 776 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 FANCBQ8NB91 859 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 ANKS1AQ92625 1134 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 DPF2Q92785 391 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 GJA3Q9Y6H8 435 aa13.97□□□□□ -0.17
LINC00880-201ENST00000471357 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 MYO1BO43795 1136 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 DDAH1O94760 285 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 CALM1P0DP23 149 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 CALM2P0DP24 149 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 CALM3P0DP25 149 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 FDPSP14324 419 aaKnown RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 ZNF280AP59817 542 aaPredicted RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 FOXP4Q8IVH2 680 aaPredicted RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 ZBED3Q96IU2 234 aaPredicted RBP13.96□□□□□ -0.17
LINC00880-201ENST00000471357 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
LINC00880-201ENST00000471357 TCP10L2B9ZVM9 353 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 F13A1P00488 732 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 GMPSP49915 693 aaPredicted RBP13.95□□□□□ -0.18
LINC00880-201ENST00000471357 TROAPQ12815 778 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 NTRK3Q16288 839 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 CRACR2BQ8N4Y2 399 aaPredicted RBP13.95□□□□□ -0.18
LINC00880-201ENST00000471357 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
LINC00880-201ENST00000471357 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 WNT10BO00744 389 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 SHMT1P34896 483 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
LINC00880-201ENST00000471357 COL2A1P02458 1487 aaPredicted RBP13.94□□□□□ -0.18
LINC00880-201ENST00000471357 ATRNL1Q5VV63 1379 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 H3BQV1 296 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 IFNAR1P17181 557 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 IFFO2Q5TF58 517 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 TRIM34Q9BYJ4 488 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 VEZTQ9HBM0 779 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 RBM28Q9NW13 759 aaKnown RBP13.94□□□□□ -0.18
LINC00880-201ENST00000471357 CNOT7Q9UIV1 285 aaKnown RBP13.94□□□□□ -0.18
LINC00880-201ENST00000471357 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
LINC00880-201ENST00000471357 AKR1B1P15121 316 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 CDC37L1Q7L3B6 337 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 METTL16Q86W50 562 aaKnown RBP13.93□□□□□ -0.18
LINC00880-201ENST00000471357 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms