RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TRAF5O00463 557 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
SREBF1-209ENST00000470247 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-209ENST00000470247 GUCY1A2P33402 732 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 TFAP4Q01664 338 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 TRDNQ13061 729 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 RABEP1Q15276 862 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 SUPT20HL1Q3ZLR7 823 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 BLOC1S2Q6QNY1 142 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-209ENST00000470247 NEDD1Q8NHV4 660 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 IGDCC4Q8TDY8 1250 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 ESR2Q92731 530 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
SREBF1-209ENST00000470247 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-209ENST00000470247 IGKV6D-41A0A0C4DH26 115 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
SREBF1-209ENST00000470247 YY1P25490 414 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 MCM5P33992 734 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 NOVP48745 357 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 NT5C2P49902 561 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 NEK4P51957 841 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 CERKLQ49MI3 558 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-209ENST00000470247 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
SREBF1-209ENST00000470247 FBXL16Q8N461 479 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-209ENST00000470247 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-209ENST00000470247 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
SREBF1-209ENST00000470247 PRC1O43663 620 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 NMT2O60551 498 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
SREBF1-209ENST00000470247 INPP5BP32019 993 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 CAP2P40123 477 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 SEC23AQ15436 765 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 DCAF15Q66K64 600 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 RCSD1Q6JBY9 416 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 SIAH1Q8IUQ4 282 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 HOOK2Q96ED9 719 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 ZKSCAN3Q9BRR0 538 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
SREBF1-209ENST00000470247 TSPY2A6NKD2 308 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 GDF11O95390 407 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 TOB2Q14106 344 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-209ENST00000470247 MAP3K11Q16584 847 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 Q6ZUG5 572 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 MOB2Q70IA6 237 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
SREBF1-209ENST00000470247 MTA3Q9BTC8 594 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 PDRG1Q9NUG6 133 aa13.27□□□□□ -0.29
SREBF1-209ENST00000470247 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
SREBF1-209ENST00000470247 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 CTNND1O60716 968 aaKnown RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 GH2P01242 217 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 AK2P54819 239 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 PRKG1Q13976 671 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 SEPT2Q15019 361 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 CST9Q5W186 159 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 LY9Q9HBG7 655 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
SREBF1-209ENST00000470247 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-209ENST00000470247 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-209ENST00000470247 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 IFIT3O14879 490 aaKnown RBP13.25□□□□□ -0.29
SREBF1-209ENST00000470247 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-209ENST00000470247 EVCP57679 992 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 LDLRAD1Q5T700 205 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 IQCA1Q86XH1 822 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-209ENST00000470247 WRNIP1Q96S55 665 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
SREBF1-209ENST00000470247 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
SREBF1-209ENST00000470247 TNKSO95271 1327 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 TOMM70O94826 608 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 LIFRP42702 1097 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
SREBF1-209ENST00000470247 NOL9Q5SY16 702 aaKnown RBP13.24□□□□□ -0.29
SREBF1-209ENST00000470247 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms