RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 HMGCS2P54868 508 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 UNC93B1Q9H1C4 597 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
LINC00173-201ENST00000470091 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
LINC00173-201ENST00000470091 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
LINC00173-201ENST00000470091 GJB1P08034 283 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 SDSP20132 328 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 ZAP70P43403 619 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 GPR108Q9NPR9 543 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
LINC00173-201ENST00000470091 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
LINC00173-201ENST00000470091 CDC45O75419 566 aa16.39■□□□□ 0.21
LINC00173-201ENST00000470091 GJA8P48165 433 aa16.39■□□□□ 0.21
LINC00173-201ENST00000470091 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
LINC00173-201ENST00000470091 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
LINC00173-201ENST00000470091 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
LINC00173-201ENST00000470091 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
LINC00173-201ENST00000470091 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
LINC00173-201ENST00000470091 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 ERC2O15083 957 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 PLCG2P16885 1265 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 PPP4CP60510 307 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 JAG1P78504 1218 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 U2AF1L4Q8WU68 220 aaKnown RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 COA7Q96BR5 231 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
LINC00173-201ENST00000470091 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 RBM19Q9Y4C8 960 aaKnown RBP16.38■□□□□ 0.21
LINC00173-201ENST00000470091 SEC24BO95487 1268 aa16.37■□□□□ 0.21
LINC00173-201ENST00000470091 TFRCP02786 760 aaKnown RBP16.37■□□□□ 0.21
LINC00173-201ENST00000470091 INHAP05111 366 aa16.37■□□□□ 0.21
LINC00173-201ENST00000470091 CYP7A1P22680 504 aa16.37■□□□□ 0.21
LINC00173-201ENST00000470091 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
LINC00173-201ENST00000470091 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
LINC00173-201ENST00000470091 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
LINC00173-201ENST00000470091 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
LINC00173-201ENST00000470091 RANBP2P49792 3224 aaKnown RBP16.36■□□□□ 0.21
LINC00173-201ENST00000470091 DOCK1Q14185 1865 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
LINC00173-201ENST00000470091 GDF11O95390 407 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 PABPC4Q13310 644 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00173-201ENST00000470091 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
LINC00173-201ENST00000470091 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 DEFB118Q96PH6 123 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
LINC00173-201ENST00000470091 PEX10O60683 326 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
LINC00173-201ENST00000470091 SGPL1O95470 568 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
LINC00173-201ENST00000470091 IRF5Q13568 498 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 MTMR2Q13614 643 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 RILPL2Q969X0 211 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 FLT1P17948 1338 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
LINC00173-201ENST00000470091 MGAMO43451 1857 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 ASNSP08243 561 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00173-201ENST00000470091 BACE1P56817 501 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
LINC00173-201ENST00000470091 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
LINC00173-201ENST00000470091 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
LINC00173-201ENST00000470091 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
LINC00173-201ENST00000470091 PTPRFP10586 1907 aa16.33■□□□□ 0.21
LINC00173-201ENST00000470091 ATP5JP18859 108 aa16.33■□□□□ 0.2
LINC00173-201ENST00000470091 USP5P45974 858 aa16.33■□□□□ 0.2
LINC00173-201ENST00000470091 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
LINC00173-201ENST00000470091 UBE2Q1Q7Z7E8 422 aa16.33■□□□□ 0.2
LINC00173-201ENST00000470091 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
LINC00173-201ENST00000470091 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
LINC00173-201ENST00000470091 COL2A1P02458 1487 aaPredicted RBP16.33■□□□□ 0.2
LINC00173-201ENST00000470091 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
LINC00173-201ENST00000470091 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
LINC00173-201ENST00000470091 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
LINC00173-201ENST00000470091 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
LINC00173-201ENST00000470091 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
LINC00173-201ENST00000470091 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
LINC00173-201ENST00000470091 TRIM32Q13049 653 aa16.31■□□□□ 0.2
LINC00173-201ENST00000470091 CASC1Q6TDU7 716 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms