RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IFIT2P09913 472 aaKnown RBP19.82■□□□□ 0.76
COL9A3-208ENST00000469802 PDE6AP16499 860 aa19.82■□□□□ 0.76
COL9A3-208ENST00000469802 FAM110CQ1W6H9 321 aa19.82■□□□□ 0.76
COL9A3-208ENST00000469802 TCRBV5S4A2TA0A5A2 114 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 GDF11O95390 407 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 GRK4P32298 578 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 USP5P45974 858 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 BACE1P56817 501 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 MTMR2Q13614 643 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 TRIM34Q9BYJ4 488 aa19.81■□□□□ 0.76
COL9A3-208ENST00000469802 GOLIM4O00461 696 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL9A3-208ENST00000469802 SLC4A8Q2Y0W8 1093 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 TATDN1Q6P1N9 297 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 RAET1EQ8TD07 263 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 SERPINB13Q9UIV8 391 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 GABRQQ9UN88 632 aa19.8■□□□□ 0.76
COL9A3-208ENST00000469802 GCLCP48506 637 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-208ENST00000469802 SLC9C2Q5TAH2 1124 aa19.79■□□□□ 0.76
COL9A3-208ENST00000469802 ANKRD13CQ8N6S4 541 aa19.79■□□□□ 0.76
COL9A3-208ENST00000469802 DNAJC2Q99543 621 aaKnown RBP19.79■□□□□ 0.76
COL9A3-208ENST00000469802 ASCC2Q9H1I8 757 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-208ENST00000469802 ZNF532Q9HCE3 1301 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 MAGEB6P1A0A0J9YX57 407 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 ATP5JP18859 108 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 HOXA7P31268 230 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-208ENST00000469802 MTFR1Q15390 333 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 SLAIN1Q8ND83 568 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 SHISA4Q96DD7 197 aa19.78■□□□□ 0.76
COL9A3-208ENST00000469802 EDC3Q96F86 508 aaKnown RBP19.78■□□□□ 0.76
COL9A3-208ENST00000469802 C19orf81C9J6K1 198 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 USP17L10C9JJH3 530 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 TNPO2O14787 897 aaKnown RBP19.77■□□□□ 0.76
COL9A3-208ENST00000469802 MYCP01106 439 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-208ENST00000469802 FLT3LGP49771 235 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 IRF5Q13568 498 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 TTC6Q86TZ1 520 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 HAUS7Q99871 368 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 PAG1Q9NWQ8 432 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 MORF4L1Q9UBU8 362 aa19.77■□□□□ 0.76
COL9A3-208ENST00000469802 SLC34A2O95436 690 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 GH2P01242 217 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 SHMT1P34896 483 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 PLCD1P51178 756 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 GABPAQ06546 454 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 LCORLQ8N3X6 602 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 PXYLP1Q8TE99 480 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
COL9A3-208ENST00000469802 LRRCC1Q9C099 1032 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 TMOD4Q9NZQ9 345 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 PARP14Q460N5 1801 aa19.76■□□□□ 0.75
COL9A3-208ENST00000469802 ADD2P35612 726 aa19.75■□□□□ 0.75
COL9A3-208ENST00000469802 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
COL9A3-208ENST00000469802 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
COL9A3-208ENST00000469802 RLFQ13129 1914 aa19.74■□□□□ 0.75
COL9A3-208ENST00000469802 A0A0G2JMZ2 1700 aa19.74■□□□□ 0.75
COL9A3-208ENST00000469802 ADCY3O60266 1144 aa19.74■□□□□ 0.75
COL9A3-208ENST00000469802 CCL5P13501 91 aa19.74■□□□□ 0.75
COL9A3-208ENST00000469802 IRX3P78415 501 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-208ENST00000469802 DCP1AQ9NPI6 582 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-208ENST00000469802 EMILIN3Q9NT22 766 aa19.74■□□□□ 0.75
COL9A3-208ENST00000469802 GJB1P08034 283 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 HERVK_113P62684 666 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 UBXN2AP68543 259 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 EVX2Q03828 476 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 CERKLQ49MI3 558 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-208ENST00000469802 SDR42E1Q8WUS8 393 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 COA7Q96BR5 231 aa19.73■□□□□ 0.75
COL9A3-208ENST00000469802 GREB1LQ9C091 1923 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-208ENST00000469802 SMARCA5O60264 1052 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-208ENST00000469802 ELNP15502 786 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 GUCY1A2P33402 732 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 GJA8P48165 433 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 ABCB5Q2M3G0 1257 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 SLFNL1Q499Z3 407 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 P2RX7Q99572 595 aaKnown RBP19.72■□□□□ 0.75
COL9A3-208ENST00000469802 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL9A3-208ENST00000469802 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 DCTPP1Q9H773 170 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 ARMT1Q9H993 441 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 TXNRD2Q9NNW7 524 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 MCM9Q9NXL9 1143 aa19.72■□□□□ 0.75
COL9A3-208ENST00000469802 INHAP05111 366 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 UBE2Q1Q7Z7E8 422 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 NKX2-3Q8TAU0 364 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 KIAA1683Q9H0B3 1180 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 UNC93B1Q9H1C4 597 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 GJD2Q9UKL4 321 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 TAOK2Q9UL54 1235 aa19.71■□□□□ 0.75
COL9A3-208ENST00000469802 MBD4O95243 580 aa19.7■□□□□ 0.74
COL9A3-208ENST00000469802 CHGBP05060 677 aa19.7■□□□□ 0.74
COL9A3-208ENST00000469802 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-208ENST00000469802 RAB3GAP1Q15042 981 aa19.7■□□□□ 0.74
COL9A3-208ENST00000469802 GTF3C2Q8WUA4 911 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-208ENST00000469802 FEZ1Q99689 392 aa19.7■□□□□ 0.74
COL9A3-208ENST00000469802 RNF208Q9H0X6 261 aa19.7■□□□□ 0.74
COL9A3-208ENST00000469802 BIN2Q9UBW5 565 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms