RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 ZNF280CQ8ND82 737 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-215ENST00000468018 HTTP42858 3142 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 TRIM75PA6NK02 468 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
ATG4B-215ENST00000468018 ZFYP08048 801 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-215ENST00000468018 PDE1AP54750 535 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 PROCA1Q8NCQ7 364 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-215ENST00000468018 APPBP2Q92624 585 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 OSBP2Q969R2 916 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 STRBPQ96SI9 672 aaKnown RBP18.28■□□□□ 0.52
ATG4B-215ENST00000468018 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
ATG4B-215ENST00000468018 GDF11O95390 407 aa18.27■□□□□ 0.52
ATG4B-215ENST00000468018 SPP2Q13103 211 aa18.27■□□□□ 0.52
ATG4B-215ENST00000468018 AS3MTQ9HBK9 375 aa18.27■□□□□ 0.52
ATG4B-215ENST00000468018 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-215ENST00000468018 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
ATG4B-215ENST00000468018 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
ATG4B-215ENST00000468018 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
ATG4B-215ENST00000468018 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
ATG4B-215ENST00000468018 AGTPBP1Q9UPW5 1226 aa18.26■□□□□ 0.51
ATG4B-215ENST00000468018 CYP2D6P10635 497 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 BCRP11274 1271 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 BACE1P56817 501 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 NUCB1Q02818 461 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 FBXO46Q6PJ61 603 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-215ENST00000468018 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 SLC4A4Q9Y6R1 1079 aa18.25■□□□□ 0.51
ATG4B-215ENST00000468018 GH2P01242 217 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 CYP2C8P10632 490 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 GUCY1A2P33402 732 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 HMGCS2P54868 508 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-215ENST00000468018 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-215ENST00000468018 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 GADL1Q6ZQY3 521 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-215ENST00000468018 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
ATG4B-215ENST00000468018 RBBP6Q7Z6E9 1792 aaKnown RBP18.23■□□□□ 0.51
ATG4B-215ENST00000468018 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 M0R2C6 588 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 GPAA1O43292 621 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
ATG4B-215ENST00000468018 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 CTR9Q6PD62 1173 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 SWAP70Q9UH65 585 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 RLFQ13129 1914 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 PARP14Q460N5 1801 aa18.23■□□□□ 0.51
ATG4B-215ENST00000468018 ROBO3Q96MS0 1386 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 USP17L21D6R901 530 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 CAPN15O75808 1086 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 CTGFP29279 349 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 MTMR2Q13614 643 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 ABCB5Q2M3G0 1257 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 SBK1Q52WX2 424 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 PLEKHM2Q8IWE5 1019 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 EFCC1Q9HA90 598 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-215ENST00000468018 ARPP21Q9UBL0 812 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-215ENST00000468018 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 CENPFP49454 3210 aa18.22■□□□□ 0.51
ATG4B-215ENST00000468018 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 HOXA7P31268 230 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-215ENST00000468018 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 SLC44A5Q8NCS7 719 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
ATG4B-215ENST00000468018 ARHGAP39Q9C0H5 1083 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
ATG4B-215ENST00000468018 GNAT2P19087 354 aa18.2■□□□□ 0.5
ATG4B-215ENST00000468018 EMILIN3Q9NT22 766 aa18.2■□□□□ 0.5
ATG4B-215ENST00000468018 PNMA3Q9UL41 463 aa18.2■□□□□ 0.5
ATG4B-215ENST00000468018 GNRH1P01148 92 aa18.19■□□□□ 0.5
ATG4B-215ENST00000468018 CDK8P49336 464 aa18.19■□□□□ 0.5
ATG4B-215ENST00000468018 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-215ENST00000468018 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
ATG4B-215ENST00000468018 CABP5Q9NP86 173 aa18.19■□□□□ 0.5
ATG4B-215ENST00000468018 MYH4Q9Y623 1939 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 CCDC85CA6NKD9 419 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 PATL2C9JE40 543 aaKnown RBP18.18■□□□□ 0.5
ATG4B-215ENST00000468018 FOXP2O15409 715 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 RGS19P49795 217 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms