RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 UNCXA6NJT0 531 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
DDX56-208ENST00000467318 PRDM1O75626 825 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 CELF2O95319 508 aaKnown RBP17.42■□□□□ 0.38
DDX56-208ENST00000467318 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
DDX56-208ENST00000467318 RASA1P20936 1047 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 PSMA5P28066 241 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 SLC4A3P48751 1232 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 IL17RAQ96F46 866 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 WRNIP1Q96S55 665 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 ZNF408Q9H9D4 720 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 TAF6LQ9Y6J9 622 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 NEDD4P46934 1319 aa17.41■□□□□ 0.38
DDX56-208ENST00000467318 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
DDX56-208ENST00000467318 CAP2P40123 477 aa17.41■□□□□ 0.38
DDX56-208ENST00000467318 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
DDX56-208ENST00000467318 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
DDX56-208ENST00000467318 STOX1Q6ZVD7 989 aa17.41■□□□□ 0.38
DDX56-208ENST00000467318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX56-208ENST00000467318 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
DDX56-208ENST00000467318 GBA2Q9HCG7 927 aaPredicted RBP17.41■□□□□ 0.38
DDX56-208ENST00000467318 ANGEL1Q9UNK9 670 aaKnown RBP17.41■□□□□ 0.38
DDX56-208ENST00000467318 TACC3Q9Y6A5 838 aa17.41■□□□□ 0.38
DDX56-208ENST00000467318 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 B4E1Z4 1266 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 PRKG1Q13976 671 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
DDX56-208ENST00000467318 ASNSP08243 561 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 TSPY3P0CV98 308 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 TSPY8P0CW00 308 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 TFAP4Q01664 338 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 CST9Q5W186 159 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 ZSWIM5Q9P217 1185 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 KDM4AO75164 1064 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 TMEM179Q6ZVK1 233 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 MOB2Q70IA6 237 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
DDX56-208ENST00000467318 CSADQ9Y600 493 aa17.39■□□□□ 0.37
DDX56-208ENST00000467318 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 MYH8P13535 1937 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
DDX56-208ENST00000467318 AKR1B1P15121 316 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 INPP5BP32019 993 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 MCM5P33992 734 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 RRP1BQ14684 758 aaKnown RBP17.38■□□□□ 0.37
DDX56-208ENST00000467318 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 NOL9Q5SY16 702 aaKnown RBP17.38■□□□□ 0.37
DDX56-208ENST00000467318 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
DDX56-208ENST00000467318 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 PAPPA2Q9BXP8 1791 aa17.38■□□□□ 0.37
DDX56-208ENST00000467318 PLIN4Q96Q06 1357 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 GDF11O95390 407 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 LDLRAD1Q5T700 205 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
DDX56-208ENST00000467318 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
DDX56-208ENST00000467318 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 ZKSCAN4Q969J2 545 aaPredicted RBP17.37■□□□□ 0.37
DDX56-208ENST00000467318 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
DDX56-208ENST00000467318 GH2P01242 217 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
DDX56-208ENST00000467318 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
DDX56-208ENST00000467318 SHROOM1Q2M3G4 852 aaPredicted RBP17.36■□□□□ 0.37
DDX56-208ENST00000467318 KANSL2Q9H9L4 492 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 UBE2Q2LH0YL09 131 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 VGLL4Q14135 290 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 RUFY3Q7L099 469 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 NKX2-3Q8TAU0 364 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
DDX56-208ENST00000467318 TMEM88BA6NKF7 163 aa17.35■□□□□ 0.37
DDX56-208ENST00000467318 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
DDX56-208ENST00000467318 TMEM87BQ96K49 555 aa17.35■□□□□ 0.37
DDX56-208ENST00000467318 TTC14Q96N46 770 aa17.35■□□□□ 0.37
DDX56-208ENST00000467318 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDX56-208ENST00000467318 IGKV6D-41A0A0C4DH26 115 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 ERICH2A1L162 156 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
DDX56-208ENST00000467318 SEPT2Q15019 361 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 CYB5R4Q7L1T6 521 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 ZSCAN10Q96SZ4 725 aaPredicted RBP17.34■□□□□ 0.37
DDX56-208ENST00000467318 KIF2CQ99661 725 aa17.34■□□□□ 0.37
DDX56-208ENST00000467318 IL17RBQ9NRM6 502 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms