RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF827Q17R98 1081 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 CDKAL1Q5VV42 579 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 SLC35F6Q8N357 371 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 PPM1EQ8WY54 764 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 TBC1D2BQ9UPU7 963 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 SRPRBQ9Y5M8 271 aaKnown RBP22.41■■□□□ 1.18
SDF4-205ENST00000465727 GLI3P10071 1580 aa22.41■■□□□ 1.18
SDF4-205ENST00000465727 MYO5AQ9Y4I1 1855 aaKnown RBP22.41■■□□□ 1.18
SDF4-205ENST00000465727 NID2Q14112 1375 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 SYNRGQ9UMZ2 1314 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 TEX33O43247 280 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 FMNL1O95466 1100 aaPredicted RBP22.4■■□□□ 1.18
SDF4-205ENST00000465727 TTC31Q49AM3 519 aaPredicted RBP22.4■■□□□ 1.18
SDF4-205ENST00000465727 ICE2Q659A1 982 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 ZNF594Q96JF6 807 aaPredicted RBP22.4■■□□□ 1.18
SDF4-205ENST00000465727 RHOXF2BP0C7M4 288 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 LIFRP42702 1097 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 CORO7P57737 925 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 SPECC1Q5M775 1068 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 TBC1D10CQ8IV04 446 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 IGDCC4Q8TDY8 1250 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 RHOXF2Q9BQY4 288 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 BRMS1Q9HCU9 246 aa22.4■■□□□ 1.18
SDF4-205ENST00000465727 EIF3CLB5ME19 914 aaKnown RBP22.39■■□□□ 1.17
SDF4-205ENST00000465727 TOB1P50616 345 aaPredicted RBP22.39■■□□□ 1.17
SDF4-205ENST00000465727 EIF3CQ99613 913 aaKnown RBP22.39■■□□□ 1.17
SDF4-205ENST00000465727 IFNAR1P17181 557 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 RXRAP19793 462 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 ZAP70P43403 619 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 MAP9Q49MG5 647 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 NFXL1Q6ZNB6 911 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 SUGCTQ9HAC7 445 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 LY9Q9HBG7 655 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 FAM217BQ9NTX9 383 aaPredicted RBP22.38■■□□□ 1.17
SDF4-205ENST00000465727 IRX3P78415 501 aaPredicted RBP22.38■■□□□ 1.17
SDF4-205ENST00000465727 CUL4BQ13620 913 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 TRIM14Q14142 442 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 LRRC31Q6UY01 552 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 DIS3L2Q8IYB7 885 aaKnown RBP22.38■■□□□ 1.17
SDF4-205ENST00000465727 CCDC148Q8NFR7 591 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 FBXO41Q8TF61 875 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 SLC26A6Q9BXS9 759 aa22.38■■□□□ 1.17
SDF4-205ENST00000465727 PUS3Q9BZE2 481 aaKnown RBP22.38■■□□□ 1.17
SDF4-205ENST00000465727 PPFIA4O75335 1185 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 CASP14P31944 242 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 FAM204AQ9H8W3 233 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 MYO6Q9UM54 1294 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 BTBD18B2RXH4 712 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 GYPCP04921 128 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 ADORA1P30542 326 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 AMPD2Q01433 879 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 CYP26C1Q6V0L0 522 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 CPLX3Q8WVH0 158 aa22.37■■□□□ 1.17
SDF4-205ENST00000465727 MYH8P13535 1937 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 LRP6O75581 1613 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 ADD2P35612 726 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 GRIN1Q05586 938 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 TRIM22Q8IYM9 498 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 GSDMAQ96QA5 445 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 FAM107BQ9H098 131 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 SLC12A7Q9Y666 1083 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 MST1RQ04912 1400 aa22.36■■□□□ 1.17
SDF4-205ENST00000465727 A0A0U1RQJ8 604 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 LRRIQ3A6PVS8 624 aaPredicted RBP22.35■■□□□ 1.17
SDF4-205ENST00000465727 B4E1Z4 1266 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 SCARF1Q14162 830 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SDF4-205ENST00000465727 TMEM67Q5HYA8 995 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 WWC2Q6AWC2 1192 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 EFCAB13Q8IY85 973 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 GRAMD1CQ8IYS0 662 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 ATRIPQ8WXE1 791 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 CDC5LQ99459 802 aaKnown RBP22.35■■□□□ 1.17
SDF4-205ENST00000465727 TRPM3Q9HCF6 1732 aaPredicted RBP22.35■■□□□ 1.17
SDF4-205ENST00000465727 HSP90AB3PQ58FF7 597 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 AFAP1L1Q8TED9 768 aa22.35■■□□□ 1.17
SDF4-205ENST00000465727 AKAP11Q9UKA4 1901 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 MEGF6O75095 1541 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 RNF40O75150 1001 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 CPP00450 1065 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 GTF2A1P52655 376 aaPredicted RBP22.34■■□□□ 1.17
SDF4-205ENST00000465727 UBE3CQ15386 1083 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 FOXR1Q6PIV2 292 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 RPGRIP1Q96KN7 1286 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 STRN4Q9NRL3 753 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 ABHD10Q9NUJ1 306 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 AATFQ9NY61 560 aaKnown RBP eCLIP22.34■■□□□ 1.176e-8■■■■■ 44.5
SDF4-205ENST00000465727 DENND2AQ9ULE3 1009 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 PKD1L3Q7Z443 1732 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 CHD4Q14839 1912 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 ARHGAP25P42331 645 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 FXR1P51114 621 aaKnown RBP eCLIP22.34■■□□□ 1.17
SDF4-205ENST00000465727 ACRBPQ8NEB7 543 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 ZNF512BQ96KM6 892 aaPredicted RBP22.34■■□□□ 1.17
SDF4-205ENST00000465727 SENP2Q9HC62 589 aa22.34■■□□□ 1.17
SDF4-205ENST00000465727 BCL9LQ86UU0 1499 aa22.33■■□□□ 1.17
SDF4-205ENST00000465727 NBPF26B4DH59 902 aa22.33■■□□□ 1.17
SDF4-205ENST00000465727 SPAG1Q07617 926 aa22.33■■□□□ 1.17
SDF4-205ENST00000465727 ALX1Q15699 326 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms